LOCUS AK298211 1456 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55734 complete cds, highly similar to Sorting
nexin-7.
ACCESSION AK298211
VERSION AK298211.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1456)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1456
/cell_line="IMR32"
/cell_type="neuroblastoma"
/clone="IMR322013782"
/clone_lib="IMR322"
/db_xref="H-InvDB:HIT000492835"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 91..1089
/codon_start=1
/note="highly similar to Sorting nexin-7"
/protein_id="BAG60481.1"
/transl_table=1
/translation="MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVT
TIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPELSSHKKQ
GPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEER
EYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHE
YVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALK
ADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP"
BASE COUNT 474 a 245 c 316 g 421 t
ORIGIN
1 agcggctctt ccgccctgct gcaggcggag gtgctggatc tggacgagga cgaggacgac
61 ctggaggtgt tcagcaagga tgcctcattg atggacatga actccttcag ccctatgatg
121 ccaacatccc ctttatcaat gataaaccaa atcaagtttg aggatgaacc agatttaaag
181 gatctcttca tcacagttga tgaacctgaa agtcatgtta ctacaataga aactttcatt
241 acgtatagga ttattactaa gacatctcgt ggggaatttg actccagtga atttgaagtt
301 aggagacgat atcaagattt cctttggttg aagggaaaac tggaagaagc acaccccact
361 ctgattattc cagaactctc ttctcacaag aagcaaggtc ctggcttgct aagcaggatg
421 gggcaaaccg tcagagctgt tgcgtcctca atgagaggag ttaaaaaccg cccagaggag
481 ttcatggaaa tgaataactt tattgaacta tttagccaga aaataaattt gatagataaa
541 atatctcaga gaatttataa ggaagaaagg gaatattttg atgaaatgaa agaatatggc
601 ccaattcata ttctgtggtc agcgtcagaa gaggatctgg ttgatactct aaaggatgtt
661 gccagctgca ttgacagatg ctgtaaggcc actgaaaaac ggatgtctgg actctcagag
721 gccctgcttc ctgttgtaca tgaatacgtg ctttatagtg aaatgttaat gggtgttatg
781 aaaagaagag accaaataca agcagaactg gattccaaag ttgaagtttt gacctataaa
841 aaggcagata ctgatctgct tccagaggag attggaaaac ttgaagataa agtggaatgt
901 gctaataatg ccctgaaagc agattgggag agatggaaac aaaatatgca aaatgatatc
961 aagttagcat ttacagatat ggctgaggag aatatccatt attatgaaca gtgccttgct
1021 acgtgggaat cattccttac atcacagacc aaccttcact tggaagaagc ctctgaagat
1081 aaaccttaat cccattgagg acttctgttt gatctttggg agacagcatt tattaaccaa
1141 agttattctt tctggatctg ccgtgtcctt ataaagtgga tgaaaaatgt tttgtaccca
1201 tctggaaaac caacaacttg aaatctcagg tattccaggt cactgacatg aatttgaaga
1261 tatatctatc tgtatggata tatatctata tgtatataga tatataaata cagagagata
1321 tctggcttgg ttttaattat gttcttaaat ttgtgtgcca ataattgcat atagattttt
1381 tttcttaaat atttgactgt ggaacatgcc attttaaata tgttgtaagg actgttttaa
1441 taaaaagttt agtatg
//