LOCUS AK298182 1640 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51261 complete cds, highly similar to
Homeobox prospero-like protein PROX1.
ACCESSION AK298182
VERSION AK298182.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1640)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1640
/cell_line="IMR32"
/cell_type="neuroblastoma"
/clone="IMR322007182"
/clone_lib="IMR322"
/db_xref="H-InvDB:HIT000492806"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 128..1057
/codon_start=1
/note="highly similar to Homeobox prospero-like protein
PROX1"
/protein_id="BAG60453.1"
/transl_table=1
/translation="MASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSAT
TGFTTSTFRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSS
HHLSHHPCSPAHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKA
KLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG
VTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDP
SWKKAIYKVICKLDSEVPEIFKSPNCLQELLHE"
BASE COUNT 431 a 413 c 338 g 458 t
ORIGIN
1 gtcttaaagt aaatcttgtt gtggagcgga gccctcagct gagggagcgc tctgaaataa
61 tacaccattg cagtgctttg gcgacgtcat cattccgaac cccctggaca cctttggcaa
121 tgtgcagatg gccagttcca ctgaccagac agaagcactg cccctggttg tccgcaaaaa
181 ctcctctgac cagtctgcct ccggccctgc cgctggcggc caccaccagc ccctgcacca
241 gtcgcctctc tctgccacca cgggcttcac cacgtccacc ttccgccacc ccttccccct
301 tcccttgatg gcctatccat ttcagagccc attaggtgct ccctccggct ccttctctgg
361 aaaagacaga gcctctcctg aatccttaga cttaactagg gataccacga gtctgaggac
421 caagatgtca tctcaccacc tgagccacca cccttgttca ccagcacacc cgcccagcac
481 cgccgaaggg ctctccttgt cgctcataaa gtccgagtgc ggcgatcttc aagatatgtc
541 tgaaatatca ccttattcgg gaagtgcaat gcaggaagga ttgtcaccca atcacttgaa
601 aaaagcaaag ctcatgtttt tttatacccg ttatcccagc tccaatatgc tgaagaccta
661 cttctccgac gtaaagttca acagatgcat tacctctcag ctcatcaagt ggtttagcaa
721 tttccgtgag ttttactaca ttcagatgga gaagtacgca cgtcaagcca tcaacgatgg
781 ggtcaccagt actgaagagc tgtctataac cagagactgt gagctgtaca gggctctgaa
841 catgcactac aataaagcaa atgactttga ggttccagag agattcctgg aagttgctca
901 gatcacatta cgggagtttt tcaatgccat tatcgcaggc aaagatgttg atccttcctg
961 gaagaaggcc atatacaagg tcatctgcaa gctggatagt gaagtccctg agattttcaa
1021 atccccgaac tgcctacaag agctgcttca tgagtagaaa tttcaacaac tctttttgaa
1081 tgtatgaaga gtagcagtcc cctttggatg tccaagttat atgtgtctag attttgattt
1141 catatatatg tgtatgggag gcatggatat gttatgaaat cagctggtaa ttcctcctca
1201 tcacgtttct ctcattttct tttgttttcc attgcaaggg gatggttgtt ttctttctgc
1261 ctttagtttg cttttgccca aggcccttaa catttggaca cttaaaatag ggttaatttt
1321 cagggaaaaa gaatgttggc gtgtgtaaag tctctattag caatgaaggg aatttgttaa
1381 cgatgcatcc acttgattga tgacttattg caaatggcgg ttggctgagg aaaacccatg
1441 acacagcaca actctacaga cagtgatgtg tctcttgttt ctactgctaa gaaggtctga
1501 aaatttaatg aaaccacttc atacatttaa gtattttgtt tggtttgaac tcaatcagta
1561 gcttttcctt acatgtttaa aaataattcc aatgacagat gagcagctca cttttccaaa
1621 gtaccccaaa aggccaaatt
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