LOCUS AK298178 1561 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56995 complete cds, highly similar to THUMP
domain-containing protein 2.
ACCESSION AK298178
VERSION AK298178.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1561
/cell_line="IMR32"
/cell_type="neuroblastoma"
/clone="IMR322006656"
/clone_lib="IMR322"
/db_xref="H-InvDB:HIT000492802"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 252..1436
/codon_start=1
/note="highly similar to THUMP domain-containing protein
2"
/protein_id="BAG60449.1"
/transl_table=1
/translation="MQRLINEDPGSWLNAISIWKNLLELDAKKEKLSQRDDNQLKRKV
GENEIIAKKLKIEQMQKIEENWDCQLEKQIKEETLEQRDFTTKSEKFQEEEFQNDIEK
AIDTHNQNDLTFREVGKVIGIAIMKHFGWKADLRNPQLEIFIHLNDIYSVVGIPVFRV
SLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVYYVG
ADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLGK
DIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLN
PEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSS
GL"
BASE COUNT 521 a 276 c 353 g 411 t
ORIGIN
1 gagccagggt ccgggcctga ggctggcgcc cgattcttct gcactgcggg tcgcggcctg
61 gagccgttcg taatgcgaga ggtgcgggcg cggctggcgg ccacgcaggt tgaatatatt
121 tcaggaaagg tttttttcac cacctgttct gatttgaata tgttgaagaa attaaaatct
181 gcagaaagat tatttttgct gattaaaaag cagtttccac ttattatttc ttctgaaaaa
241 tatttaatga aatgcaaaga cttataaatg aagatccagg aagttggttg aatgccattt
301 caatttggaa aaatcttctt gaacttgatg caaaaaagga aaaactttct cagagagatg
361 ataaccaact aaaaagaaaa gtgggagaaa atgaaatcat tgcaaagaaa ttaaaaatag
421 aacaaatgca aaagatagaa gagaattggg actgccagct ggaaaaacaa ataaaagaag
481 aaactctgga gcaaagagat tttaccacta aaagcgaaaa gtttcaagaa gaagaatttc
541 agaatgacat agagaaagca attgatactc ataatcagaa tgacttgact ttcagagagg
601 taggaaaagt aattggaatt gctattatga aacactttgg atggaaagca gacttgagga
661 atccacaatt agagatcttt atacatctaa atgacattta ctctgtggtg gggattcctg
721 tgttcagggt ttccctagcc agcagagctt acatcaagac agctggactg cgatctacaa
781 tagcgtgggc aatggcatct ctggctgaca ttaaggctgg tgcatttgtt ttagatccaa
841 tgtgtggact tggaacaata cttttggaag ctgctaaaga atggccagat gtgtattatg
901 taggtgctga tgtcagcgac tcacagttac taggtacttg ggacaatctg aaagctgcag
961 gccttgagga taaaattgaa ttacttaaaa tctctgttat agaattgcca ttgccttcag
1021 aaagtgttga tattattatt tctgacattc catttgggaa aaagtttaag ttaggaaaag
1081 acatcaaaag cattctacaa gaaatggaaa gagtgcttca tgttggcgga accattgtat
1141 tgttgcttag tgaagatcac cacaggcgcc ttacagattg taaagagagc aacatccctt
1201 tcaattccaa ggacagtcac acagatgaac ctggaattaa aaagtgcttg aatcctgaag
1261 aaaaaactgg tgcattcaag acagcgtcaa cttcattcga agccagtaac cacaaattct
1321 tagacagaat gtcaccattt ggctccttgg taccagtgga atgctacaaa gttagccttg
1381 gaaagacaga tgcgttcata tgtaaatata agaagtcgca ctcttctgga ctgtagcagg
1441 cttgctgcca tcagccgggt tcaggccctt gtaagttagc tgtacagcag aagtttgctg
1501 tctctaggat tcatatagca cccacagagc tccaagtaac caaattcccc caaagacagg
1561 a
//