LOCUS AK298144 1421 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61145 complete cds, highly similar to Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC 2.4.1.142). ACCESSION AK298144 VERSION AK298144.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1421) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1421 /cell_type="synoviocytes from rheumatioid arthritis (HS-RA)" /clone="HSYRA2008911" /clone_lib="HSYRA2" /db_xref="H-InvDB:HIT000492768" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, synoviocytes from rheumatioid arthritis" /organism="Homo sapiens" CDS 182..1243 /codon_start=1 /note="highly similar to Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC 2.4.1.142)" /protein_id="BAG60420.1" /transl_table=1 /translation="MYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVID WHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAVT VYDKPASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFTERDAGSGLVT RLRERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITGKGPLREYY SRLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCL PVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNLRESQ QLRWDESWVQTVLPLVMDT" BASE COUNT 300 a 386 c 397 g 338 t ORIGIN 1 cacgtgtcag aagtgtgtta agtgaatcca ttgcgtggtc tcacgtaatt ctcctaactc 61 caaaccccat gatgagctct tgcagaacaa cagaattcag attgtggggt tgacagaact 121 tcagagtctt gcagttgggc cccgagtttt ccagtacgga gtcaaagttg tacttcaggc 181 tatgtacttg ctgtggaagt tgatgtggag ggagccaggt gcctatatct ttctccagaa 241 ccccccaggt ctgcctagca ttgctgtctg ctggttcgtg ggctgccttt gtggaagcaa 301 gctcgtcatt gactggcaca actatggcta ctccatcatg ggtctggtgc atggccccaa 361 ccatcccctc gttctgctgg ccaagtggta cgagaagttc tttgggcgcc tgtcccacct 421 gaacctgtgt gttaccaatg ctatgcgaga agacctggcg gataactggc acatcagggc 481 tgtgaccgtc tacgacaagc ccgcatcttt ctttaaagag acacctctgg acctgcagca 541 ccggctcttc atgaagctgg gcagcatgca ctctccgttc agggcccgct cagaacctga 601 ggacccagtc acggagcggt cggccttcac ggagcgggat gctgggagcg ggctggtgac 661 gcgtctccgt gagcggccag ccctgctggt cagcagcacg agctggacag aggacgaaga 721 cttctccatc ctgctggcag ctttagaaaa gtttgaacaa ctgactcttg atggacacaa 781 ccttccttct ctcgtctgtg tgataacagg caaagggcct ctgagggagt attatagccg 841 cctcatccac cagaagcact tccagcacat ccaggtctgc accccctggc tggaggccga 901 ggactacccc ctgcttctag ggtcggcgga cctgggtgtc tgtctgcaca cgtcctccag 961 tggcctggac ctgcccatga aggtggtgga catgttcggg tgctgtttgc ctgtgtgtgc 1021 tgtgaacttc aagtgtttac atgagctggt gaaacatgaa gaaaatggcc tggtctttga 1081 ggactcagag gaactggcag ctcagctgca gatgcttttc tcaaactttc ctgatcctgc 1141 gggcaagcta aaccagttcc ggaagaacct gcgggagtcg cagcagctcc gatgggatga 1201 gagctgggtg cagactgtgc tccctttagt tatggacaca taactcctgg gccagaggct 1261 ataaaacccc aggacccctg ctgtccttcc cgcagcttct tcttggagtc tcagggcaaa 1321 ccctttcgag cagcacctcc cagtggccag aagctgaaat gacagcagtg gtactgcctg 1381 gtaaaagaat tggttctgtg acccgggaag ctttggttgg c //