LOCUS AK298128 1472 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53013 complete cds, highly similar to TFIIH
basal transcription factor complex p34 subunit.
ACCESSION AK298128
VERSION AK298128.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1472)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1472
/cell_type="synoviocytes from rheumatioid arthritis
(HS-RA)"
/clone="HSYRA2000016"
/clone_lib="HSYRA2"
/db_xref="H-InvDB:HIT000492752"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, synoviocytes from rheumatioid
arthritis"
/organism="Homo sapiens"
CDS 75..878
/codon_start=1
/note="highly similar to TFIIH basal transcription factor
complex p34 subunit"
/protein_id="BAG60408.1"
/transl_table=1
/translation="MVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDP
GNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCY
IHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSG
LLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHR
NLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAKKKKLKVSA"
BASE COUNT 439 a 283 c 293 g 457 t
ORIGIN
1 acttgctctg cgctgaggtg ctgggacagc catggtttca gacgttcact ttatccaaat
61 gcatagatgc cgtgatggtg ctgggaaatt cgcatttatt catgaatcgt tccaacaaac
121 ttgctgtgat agcaagtcac attcaagaaa gccgattctt atatcctgga aagaatggca
181 gacttggaga cttcttcgga gaccctggca accctcctga atttaatccc tctgggagta
241 aagatggaaa atacgaactt ttaacctcag caaatgaagt tattgttgaa gagattaaag
301 atctaatgac caaaagtgac ataaagggtc aacatacaga aactttgctg gcaggatccc
361 tggccaaagc cctttgctac attcatagaa tgaacaagga agttaaagac aatcaggaaa
421 tgaaatcaag gatattggtg attaaggctg cagaagacag tgcgttgcag tatatgaact
481 tcatgaatgt catctttgca gcacagaaac agaatatttt gattgatgcc tgtgttttag
541 actccgactc agggctcctc caacaggctt gtgacatcac gggaggactg tacctgaagg
601 tgcctcagat gccttctctt ctgcagtatt tgctgtgggt gtttcttccc gatcaagatc
661 agagatctca gttaatcctc ccacccccag ttcatgttga ctacagggct gcttgcttct
721 gtcatcgaaa tctcattgaa attggttatg tctgttctgt gtgtttgtca atattctgca
781 atttcagccc catttgtact acgtgcgaga cagcctttaa aatttctctg cctccagtgc
841 tgaaagccaa gaaaaagaaa ctgaaagtgt ctgcctgagg ataaaatatt ttccccatct
901 tttagagctg ttaatagaaa ttatacagca gattctttgt tgggaagact gaaaaaaata
961 aagataggta taggataatt tttaatatgg tgaccttaca gaaaatattt cccaaacatc
1021 cttttcatcc tgtgcttctg gaggactgat ttgtttgagg gaatcattct atgcattata
1081 tcctaaaata ttctatgact ggtttctgtc catgtttgtg gctttcattt ttttaatggg
1141 atgactatta gtcaaagtca gcttgtcatg actcatcata ggctttctaa cctactccct
1201 gaatccgggt cctcattgtg aaatgcatgc catacgaaat ttgaacgtag ctttggaaaa
1261 agggactatt tgtggagtaa tggcattaat caacatagaa catcttattt gaatcaacag
1321 ttaacttcag tagtcatgtg aataaaattc ttattgtcta aattgagaca gcctcagata
1381 tttgcagata tttacttttt gtctgatatc agtacatatt tggacaaagt catctaaata
1441 atagtttgtc accaaataac tacaaaatct ca
//