LOCUS AK298120 2949 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53819 partial cds, highly similar to
Tyrosine-protein phosphatase non-receptor type 14 (EC 3.1.3.48).
ACCESSION AK298120
VERSION AK298120.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2949)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2949
/clone="HLUNG2018558"
/clone_lib="HLUNG2"
/db_xref="H-InvDB:HIT000492744"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 544..>2949
/codon_start=1
/note="highly similar to Tyrosine-protein phosphatase
non-receptor type 14 (EC 3.1.3.48)"
/protein_id="BAG60402.1"
/transl_table=1
/translation="MFYVPNVSWLQQEATRYQYYLQVKKDVLEGRLRCTLDQVIRLAG
LAVQADFGDYNQFDSQDFLREYVLFPMDLALEEAVLEELTQKVAQEHKAHSGILPAEA
ELMYINEVERLDGFGQEIFPVKDNHGNCVHLGIFFMGIFVRNRIGRQAVIYRWNDMGN
ITHNKSTILVELINKEETALFHTDDIENAKYISRLFATRHKFYKQNKICTEQSNSPPP
IRRQPTWSRSSLPRQQPYILPPVHVQCGEHYSETHTSQDSIFHGNEEALYCNSHNSLD
LNYLNGTVTNGSVCSVHSVNSLNCSQSFIQASPVSSNLSIPGSDIMRADYIPSHRHSA
IIVPSYRPTPDYETVMRQMKRGILHTDSQSQSLRNLNIINTHAYNQPEDLAYSQPEMR
ERHPYTVPYGPQGVYSNKLVSPSDQRNPKNNVVPSKPGASAISHTVSTPELANMQLQG
SHNYSTAHMLKNYLFRPPPPYPRPRPATSTPDLASHRHKYVSGSSPDLVTRKVQLSVK
TFQEDSSPVVHQSLQEVSEPLTATKHHGTVNKRHSLEVMNSMVRGMEAMTLKSLHLPM
ARRNTLREQGPPEEGSGSHEVPQLPQYHHKKTFSDATMLIHSSESEEEEEEAPESVPQ
IPMLREKMEYSAQLQAALARIPNKPPPEYPGPRKSVSNGALRQDQASLPPAMARARVL
RHGPAKAISMSRTDPPAVNGASLGPSISEPDLTSVKERVKKEPVKERPVSEMFSLEDS
IIEREMMIRNLEKQKMAGLEAQKRPLMLAALNGLSVARVSGREENRVDATRVPMDERF
RTLK"
BASE COUNT 710 a 881 c 790 g 568 t
ORIGIN
1 ttttccaact ttttctcggc ggagtgagcg cagcgggcgc agactcgggg gcaggttgct
61 gtgcttctcc gggctcagcc gcctgctctc ctggctcagg tcctcgggga gccctagaca
121 gacatcaagt ggccactggc gctccttccc ctcccagctg agccatcctc cccggcctcc
181 tcgggcggga cagccccgtg cttaggtttt tctccttttc tcccccggtg cgcctctgct
241 cggactctcg cgccgggatc gcggcggaaa cctccctccc ctttcgcctc ctgcggctcc
301 ttcccttcgc ccctcctccg ccagtcactg gaatcaattc cgtggggaat cggctccgcc
361 gccgcgaagg acagcctttc cgcgcgggac tccggggcgc cacgggggcc atgtaagcag
421 acgcactact ttggcctttg gtttctcagc aagagccagc aagcacgatg ggtggagctg
481 gagaaacctc tgaagaaaca tctggacaaa ttcgctaatg agcctttgct tttctttgga
541 gtcatgttct atgtgccaaa tgtgtcatgg cttcagcaag aggccacaag atatcagtat
601 tacctgcaag tcaaaaaaga tgtgcttgaa gggcgattac gatgtacatt ggaccaggtg
661 attcggctag ccggcctagc tgtgcaagct gattttggag actataatca gtttgattct
721 caagatttcc tcagagagta tgtgctattt cctatggatt tggccctgga agaggctgtt
781 ctggaggagc tgacccagaa ggtagcccaa gaacacaaag cccacagtgg aatcctgcca
841 gcagaagctg aactgatgta catcaatgaa gttgaacgtt tggatggatt tggacaggaa
901 atcttccctg taaaggacaa tcatggaaac tgtgtacacc ttggcatttt ctttatgggg
961 attttcgtga ggaacagaat tggaagacaa gcggtaatat acaggtggaa tgacatgggg
1021 aatatcactc ataacaagtc gaccattcta gtggagctca tcaacaaaga agagactgcc
1081 ctctttcaca cggatgatat cgaaaatgcc aagtatattt ctcggttgtt tgccacacga
1141 cacaagtttt acaaacaaaa caaaatctgc actgaacagt caaattctcc accccccatc
1201 agacgccagc ccacctggag ccggtcctct ctgcccaggc agcagccgta catcctgcct
1261 cccgttcacg tccagtgtgg tgagcactac tcggaaacgc acacctcgca agacagcatt
1321 tttcatggga atgaagaagc cttgtattgc aactctcaca acagcctgga cttaaattat
1381 ttaaatggca ctgtcaccaa tggcagcgtg tgtagcgttc acagcgtcaa ctccctcaac
1441 tgctcgcaaa gtttcatcca ggcctcccct gtatcctcca acctcagtat ccctgggagt
1501 gacatcatgc gggccgacta catcccgagc caccggcaca gcgcgatcat cgtgccctcg
1561 tacaggccaa cccccgatta tgagacagtc atgcgccaga tgaagagggg gatcctgcat
1621 acagacagcc agagccagtc tctgagaaac ctcaacatta tcaacaccca tgcctacaac
1681 cagccagagg atctggcgta cagccaaccg gagatgcggg agaggcaccc ctacactgtc
1741 ccttatgggc cacagggggt ctacagcaac aaacttgtca gtccatctga ccagaggaac
1801 ccaaagaata atgtggtacc aagcaagccg ggggcaagcg ccatctcgca cacggtgagc
1861 accccagagc tggccaacat gcagctgcag ggcagccata actacagcac ggcccacatg
1921 cttaagaact atctcttcag gccaccgccc ccctacccac ggccacgacc tgccaccagc
1981 accccagacc tggccagcca ccgccacaag tacgtcagcg gcagcagccc ggacctggtg
2041 acccggaagg tgcagctctc ggtgaagacc ttccaagagg acagctctcc ggtggttcat
2101 cagtctctcc aggaggtgag cgagcccctc acggccacca agcaccacgg cactgtgaac
2161 aagcgccaca gcctggaggt gatgaacagc atggtgcggg gcatggaggc catgacgctc
2221 aagtcgctcc acctccccat ggctcgccgc aacacgctcc gggagcaggg accgcccgag
2281 gaggggtcag gcagccacga ggtcccccag ctccctcagt atcaccacaa gaagaccttc
2341 tctgatgcca ctatgctaat ccacagcagc gagagtgagg aggaggagga ggaggctcca
2401 gaatcggtgc cccagatccc catgctccgg gagaagatgg agtacagtgc ccagctgcag
2461 gcggccctgg cccgcatccc caacaagccc ccgcctgagt accccggtcc aaggaagagt
2521 gtgagcaatg gggctctgag gcaggaccaa gccagccttc ctcccgccat ggccagagcc
2581 agggtgctga ggcatgggcc agccaaggcc atcagcatgt ctcggactga cccgccggct
2641 gtcaacgggg cctctctcgg cccatccatc tcggaacccg acctgactag tgtgaaggag
2701 cgggtcaaaa aagagcctgt gaaggagaga cctgtgtctg aaatgttttc cctggaagac
2761 agcattatag agagagagat gatgatcagg aatctagaga agcagaagat ggcaggcctg
2821 gaggcacaga agaggccgct gatgttggca gcattgaatg ggctctcggt ggctcgagtc
2881 tcagggcggg aagagaatcg agttgatgcc acccgggttc ccatggacga gaggttcaga
2941 accctgaag
//