LOCUS AK298053 1224 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60316 complete cds, highly similar to
Apolipoprotein-L1 precursor.
ACCESSION AK298053
VERSION AK298053.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1224)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1224
/clone="HLUNG2008774"
/clone_lib="HLUNG2"
/db_xref="H-InvDB:HIT000492677"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 262..1095
/codon_start=1
/note="highly similar to Apolipoprotein-L1 precursor"
/protein_id="BAG60347.1"
/transl_table=1
/translation="MIMKDKNWHDKGQQYRNWFLKEFPRLKSKLEDNIRRLRALADGV
QKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGI
TSSTIDYGKKWWTQAQAHDLVIKSLDKLKEVKEFLGENISNFLSLAGNTYQLTRGIGK
DIRALRRARANLQSVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVA
PVSFFLVLDVVYLVYESKHLHEGAKSETAEELKKVAQELEEKLNILNNNYKILQADQE
L"
BASE COUNT 338 a 286 c 336 g 264 t
ORIGIN
1 tatacagacg cataactgga ggtgggatcc acacagctca gaacagctgg atcttgctca
61 gtctctgcca ggggaagatt ccttgagagc agtatcttta ttgaggatgc cattaagtat
121 ttcaaggaaa aagtgagcac acagaatctg ctactcctgc tgactgataa tgaggcctgg
181 aacggattcg tggctgctgc tgaactgccc aggaatgagg cagatgagct ccgtaaagct
241 ctggacaacc ttgcaagaca aatgatcatg aaagacaaaa actggcacga taaaggccag
301 cagtacagaa actggtttct gaaagagttt cctcggttga aaagtaagct tgaggataac
361 ataagaaggc tccgtgccct tgcagatggg gttcagaagg tccacaaagg caccaccatc
421 gccaatgtgg tgtctggctc tctcagcatt tcctctggca tcctgaccct cgtcggcatg
481 ggtctggcac ccttcacaga gggaggcagc cttgtactct tggaacctgg gatggagttg
541 ggaatcacag cagctttgac cgggattacc agcagtacca tagactacgg aaagaagtgg
601 tggacacaag cccaagccca cgacctggtc atcaaaagcc ttgacaaatt gaaggaggtg
661 aaggagtttt tgggtgagaa catatccaac tttctttcct tagctggcaa tacttaccaa
721 ctcacacgag gcattgggaa ggacatccgt gccctcagac gagccagagc caatcttcag
781 tcagtaccgc atgcctcagc ctcacgcccc cgggtcactg agccaatctc agctgaaagc
841 ggtgaacagg tggagagagt taatgaaccc agcatcctgg aaatgagcag aggagtcaag
901 ctcacggatg tggcccctgt aagcttcttt cttgtgctgg atgtagtcta cctcgtgtac
961 gaatcaaagc acttacatga gggggcaaag tcagagacag ctgaggagct gaagaaggtg
1021 gctcaggagc tggaggagaa gctaaacatt ctcaacaata attataagat tctgcaggcg
1081 gaccaagaac tgtgaccaca gggcagggca gccaccagga gagatatgcc tggcaggggc
1141 caggacaaaa tgcaaacttt tttttttttt ctgggacaga gtcttgctct gtcgccaggt
1201 tggagtgcag tggtgcggtc tcgg
//