LOCUS AK298051 1962 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57545 complete cds, highly similar to
Interferon-alpha/beta receptor alpha chain precursor.
ACCESSION AK298051
VERSION AK298051.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1962)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1962
/clone="HLUNG2008630"
/clone_lib="HLUNG2"
/db_xref="H-InvDB:HIT000492675"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 342..1808
/codon_start=1
/note="highly similar to Interferon-alpha/beta receptor
alpha chain precursor"
/protein_id="BAG60345.1"
/transl_table=1
/translation="MDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKENTSS
WYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWK
NSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENEL
PPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVK
TTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDS
FHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYC
VKARAHTMDEKLNKSSVFSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFL
RCINYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQ
TDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV"
BASE COUNT 655 a 386 c 387 g 534 t
ORIGIN
1 tcagccactt cctccttcca gcctcatctg gttcccaggc cgctggggac tcccaacgcc
61 actgtccaag actctagggt cagcaagcgc cccgggcgga gaagggcgag gacgaagagc
121 gccgggccgc gaccaggagc ccacccgcgc cctccgactg cagacatggg gaagagacgc
181 gggaactcca aagtcgctgg gtctgcgcag gtggaaaaaa tctaaaatct cctcaaaaag
241 tagaggtcga catcatagat gacaacttta tcctgaggtg gaacaggagc gatgagtctg
301 tcgggaatgt gactttttca ttcgattatc aaaaaactgg gatggataat tggataaaat
361 tgtctgggtg tcagaatatt actagtacca aatgcaactt ttcttcactc aagctgaatg
421 tttatgaaga aattaaattg cgtataagag cagaaaaaga aaacacttct tcatggtatg
481 aggttgactc atttacacca tttcgcaaag ctcagattgg tcctccagaa gtacatttag
541 aagctgaaga taaggcaata gtgatacaca tctctcctgg aacaaaagat agtgttatgt
601 gggctttgga tggtttaagc tttacatata gcttagttat ctggaaaaac tcttcaggtg
661 tagaagaaag gattgaaaat atttattcca gacataaaat ttataaactc tcaccagaga
721 ctacttattg tctaaaagtt aaagcagcac tacttacgtc atggaaaatt ggtgtctata
781 gtccagtaca ttgtataaag accacagttg aaaatgaact acctccacca gaaaatatag
841 aagtcagtgt ccaaaatcag aactatgttc ttaaatggga ttatacatat gcaaacatga
901 cctttcaagt tcagtggctc cacgcctttt taaaaaggaa tcctggaaac catttgtata
961 aatggaaaca aatacctgac tgtgaaaatg tcaaaactac ccagtgtgtc tttcctcaaa
1021 acgttttcca aaaaggaatt taccttctcc gcgtacaagc atctgatgga aataacacat
1081 ctttttggtc tgaagagata aagtttgata ctgaaataca agctttccta cttcctccag
1141 tctttaacat tagatccctt agtgattcat tccatatcta tatcggtgct ccaaaacagt
1201 ctggaaacac gcctgtgatc caggattatc cactgattta tgaaattatt ttttgggaaa
1261 acacttcaaa tgctgagaga aaaattatcg agaaaaaaac tgatgttaca gttcctaatt
1321 tgaaaccact gactgtatat tgtgtgaaag ccagagcaca caccatggat gaaaagctga
1381 ataaaagcag tgtttttagt gacgctgtat gtgagaaaac aaaaccagga aatacctcta
1441 aaatttggct tatagttgga atttgtattg cattatttgc tcttccgttt gtcatttatg
1501 ctgcgaaagt cttcttgaga tgcatcaatt atgtcttctt tccatcactt aaaccttctt
1561 ccagtataga tgagtatttc tctgaacagc cattgaagaa tcttctgctt tcaacttctg
1621 aggaacaaat cgaaaaatgt ttcataattg aaaatataag cacaattgct acagtagaag
1681 aaactaatca aactgatgaa gatcataaaa aatacagttc ccaaactagc caagattcag
1741 gaaattattc taatgaagat gaaagcgaaa gtaaaacaag tgaagaacta cagcaggact
1801 ttgtatgacc agaaatgaac tgtgtcaagt ataaggtttt tcagcaggag ttacactggg
1861 agcctgaggt cctcaccttc ctctcagtaa ctacagagag gacgtttccc tgtttaggga
1921 aagaaaaaac atcttcagat cataggtcct aaaaatacgg gc
//