LOCUS AK297998 2146 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60739 complete cds, highly similar to Homo
sapiens cancer susceptibility candidate 1 (CASC1), mRNA.
ACCESSION AK297998
VERSION AK297998.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2146)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2146
/clone="HLUNG2001579"
/clone_lib="HLUNG2"
/db_xref="H-InvDB:HIT000492622"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 49..2022
/codon_start=1
/note="highly similar to Homo sapiens cancer
susceptibility candidate 1 (CASC1), mRNA"
/protein_id="BAG60304.1"
/transl_table=1
/translation="MDLERRNEELEELYLLERCFPEAEKLKQETKLLSQWKHYIQCDG
SPDPSVAQEMNTFISLWKEKTNETFEEVIEKSKVVLNLIEKLKFILLETPPCDLQDKN
IIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEKVIKDENVTLYVWANL
KKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPSKEYTSAV
TELVKDDVKNVEKAISKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMSSAEEES
EAIKCEREMKVLSETVSAAQLLLVENSSEKPDFFEDNVVDLCQFTTLGGVYHLDILEL
PPQCKPVKGWMIVEILKEGLQKYTYPPETTEEFETENAFPPIEVTLEVHENVIFFEDP
VVVRWDAEGKHWRTDGISNVSYKPKERLVTFSLDTFGPVTLIQDAHINMPYQSWELRP
LDVNKVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFIIALKE
AGLNIFPTRHSHFYVIINNKVPLVEVKAYRQMALLSSAFAFGWSKWNLLCNSTKVVFK
VREHLTEECTENPNWALLMFSGDRAQRLKIKEESEAFSEALKEETEFHSTLYHMVKDF
ASEEAMEKVRSSNCQFVNSVCHMLLSTRLLSYS"
BASE COUNT 734 a 365 c 452 g 595 t
ORIGIN
1 aatttctgct ccgactctgc ggactactgc agtggagctt gactcttaat ggatctagaa
61 aggagaaatg aagaacttga agaactttat ttattagaga ggtgttttcc tgaagcagag
121 aaattgaaac aggaaactaa attgctttct cagtggaagc actacattca atgtgatggg
181 agtcctgatc cttcagtagc ccaagaaatg aacacgttta ttagtttgtg gaaagagaaa
241 acaaatgaga cttttgagga agtgattgag aagagtaaag tagtgctaaa tttaattgag
301 aaattgaaat ttattttact ggaaactcca ccatgtgatt tgcaagataa aaatataata
361 cagtaccaag aatcaatact acaactgcag gagctccttc atcttaaatt cggtgtagcc
421 acagaaatac ttctcaaaca agctagtact ttggcagatc tggacagtgg aaatatggaa
481 aaagtcatta aagatgaaaa tgttactctg tatgtgtggg caaacctcaa gaagaatcca
541 aggcacagaa gtgttagatt ctctgaaaca caaattggat ttgagattcc aaggatatta
601 gcaacaagtg acattgctgt acgactcctg catacccact atgatcatgt ttctgcactg
661 caccctgttt caacaccatc aaaagaatac acttctgcag taactgagct tgtcaaagat
721 gatgttaaga atgtagaaaa agcaatcagc aaggaggtcg aagaagagtc caaacaacaa
781 gaaagagggt ctcacttaat tcaggaggaa gaaataaaag ttgaggagga acaaggtgat
841 attgaagtga aaatgagttc tgctgaggaa gaatctgaag ccataaaatg tgaacgagag
901 atgaaagtat taagtgaaac tgtttcagca gcacagttgt tgctggtaga gaattcttct
961 gaaaagccag atttctttga agacaatgtg gtggatttat gccagttcac aactctgggt
1021 ggagtatacc acttggatat tttggagctt cctccacagt gtaaaccagt gaagggatgg
1081 atgattgtgg aaatactcaa agaaggatta cagaaataca catatcctcc ggaaactaca
1141 gaagagtttg agacagaaaa tgctttccca cctatagagg tcacacttga ggttcatgag
1201 aatgtaatct tttttgagga tcctgtggtt gtaaggtggg atgctgaagg taaacattgg
1261 agaactgatg gcatcagcaa tgtatcctac aaaccaaaag aaagacttgt aacattcagc
1321 ctggacacct ttggccctgt taccttgatt caagatgctc atattaacat gccgtaccag
1381 tcatgggaac taagaccact tgatgtaaat aaagtacttt taactgtgac tacagtattt
1441 actgagattc aaatacaaat taaggaaaac ctctgcatgt tatcttcaat caaactaaaa
1501 gacaagaaac acatctctat tttggaagga acctggatga ctcctattcc tttcattatt
1561 gctttgaaag aagctggact gaatatcttt cctactagac actctcattt ttatgttatt
1621 ataaacaata aggttccttt ggtagaagtg aaagcttatc gacagatggc cctactaagt
1681 tctgcttttg catttggttg gagcaagtgg aacctactat gtaattctac aaaagtcgta
1741 tttaaggtga gggaacacct tactgaagaa tgtactgaga atcctaattg ggccctttta
1801 atgtttagtg gtgacagagc acaaagactg aagatcaagg aagagagtga ggcattttct
1861 gaagcactta aagaagaaac tgagtttcat tctactttat atcacatggt gaaggatttt
1921 gcttctgagg aagcaatgga gaaagtcagg agttccaact gtcagtttgt caactctgtg
1981 tgccacatgc tgctctctac cagattgctc agctactcct aacctccact tacaaactgt
2041 attgtaagta tgaagaacca agcatggtga aagacaggta tttctgcaac acaatgtaat
2101 gagtgaatga atacatttca aatcaactat taaaaatttt ctaatc
//