LOCUS AK297992 1118 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60025 complete cds, highly similar to Mus
musculus PR domain containing 6 (Prdm6), mRNA.
ACCESSION AK297992
VERSION AK297992.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1118)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1118
/clone="HLUNG2000832"
/clone_lib="HLUNG2"
/db_xref="H-InvDB:HIT000492616"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 388..975
/codon_start=1
/note="highly similar to Mus musculus PR domain
containing 6 (Prdm6), mRNA"
/protein_id="BAG60300.1"
/transl_table=1
/translation="MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGAGPLKGSGAAGLL
SAPQPLQPPPPPPPPERAEPPPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAA
AALAGLSALPVSQLPVFAPLAAAAVAAEPLPPKELCLGATSGPGPVKCGGGGGGGGEG
RGAPRFRCSAEELDYYLYGQQRMEIIPLNLVSRAG"
BASE COUNT 183 a 427 c 324 g 184 t
ORIGIN
1 acacacacac acacacacac acacacacac acacacacac tcactcactc tattttgtgc
61 tgtcgtaaaa cccacgtgtc cagccgggaa gctgccagag cgtggaacca aggagccagg
121 acgcggcagc ggccaagcgc agcagcccac ggcggttgag tcgggcgccc aggtccgtcc
181 gcactctcgc gccctccgcg ggcctcccaa ttttctcgct tgcaggtcgg gaggtttccg
241 ggcggcacaa tctctaggac tctcctcccg cgctgctcag gggcatgtag cgcacgcagg
301 gcgcacactc tcgcgcaccc gcacgctcac cgagacaccc gcacgcaccc accggcagca
361 ccgagttttc agttcgaggc gccggacatg ctgaagcccg gagaccccgg cggttcggcc
421 ttcctcaaag tggacccagc ctacctgcag cactggcagc aactcttccc tcacggaggc
481 gcaggcccgc tcaagggcag cggcgccgcg ggtctcctga gcgcgccgca gcctcttcag
541 ccgccgccgc cgcccccgcc cccggagcgc gctgagcctc cgccggacag cctgcgcccg
601 cggcccgcct ctctctcctc cgcctcgtcc acgccggctt cctcttccac ctccgcctcc
661 tccgcctcct cctgcgctgc tgcggccgct gccgccgcgc tggctggtct ctcggccctg
721 ccggtgtcgc agctgccggt gttcgcgcct ctagccgccg ctgccgtcgc cgccgagccg
781 ctgcccccca aggaactgtg cctcggcgcc acctccggcc ccgggcccgt caagtgcggt
841 ggtggtggcg gcggcggcgg ggagggtcgc ggcgccccgc gcttccgctg cagcgcagag
901 gagctggact attacctgta tggccagcag cgcatggaga tcatcccgct caacctagta
961 agtcgagctg gatgaggtat atccgatgtg caaggcactg cggagaacag aatctaacag
1021 tagttcagta caggtcgaat atattctacc gagcctgtat agatatccct aggggcaccg
1081 agcttctggt gtggtacaat gacagctata cgtctttc
//