LOCUS AK297973 2469 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58153 complete cds, highly similar to
ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-).
ACCESSION AK297973
VERSION AK297973.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2469)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2469
/cell_type="dermal papilla cells (HDPC)"
/clone="HHDPC2007341"
/clone_lib="HHDPC2"
/db_xref="H-InvDB:HIT000492597"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, dermal papilla cells"
/organism="Homo sapiens"
CDS 175..2226
/codon_start=1
/note="highly similar to ATP-dependent metalloprotease
YME1L1 (EC 3.4.24.-)"
/protein_id="BAG60283.1"
/transl_table=1
/translation="MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHR
DVVPEHEAPSSEPSLNLRDLGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSA
QSFFENKYVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFLLRDRGSDVES
LDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVLLLFGIYGL
LKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTI
LGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLF
REAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGAT
NFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVG
FSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAY
HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMG
GRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQ
SAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV
R"
BASE COUNT 764 a 473 c 564 g 668 t
ORIGIN
1 gtctgtcgtt gcagtagctg taggaagggg aggccatttt ccgtttctgg gaggagtgag
61 gggcaacggg tcggagaaaa aggaaaaaag aagggctcag cgcctccccg ccgggccgtg
121 gacagagggg cacagtttcg gcaggcgggt gaggtcgctg agggcccgcc ggagatgttt
181 tccttgtcga gcacggtgca accccaggtt acagttcctc tgagtcatct catcaatgcc
241 ttccatacac caaaaaacac ttctgtttct ctcagtggag tgtcagtttc tcaaaaccag
301 catcgagatg tagttcctga gcatgaggct cccagcagtg agccttcact taacttaagg
361 gaccttggat tatctgaact aaaaattgga cagattgatc agctggtaga aaatctactt
421 cctggatttt gtaaaggcaa aaacatttct tcccattggc atacatccca tgtctctgca
481 caatccttct ttgaaaataa atatgttttc atacagtctc ggggttttaa aactttgaaa
541 tcaaggacac gacgtctcca gtctacctcc gagagattag ctgaaacaca gaatatagcg
601 ccatcattcg tgaaggggtt tcttttgcgg gacagaggat cagatgttga gagtttggac
661 aaactcatga aaaccaaaaa tatacctgaa gctcaccaag atgcatttaa aactggtttt
721 gcggaaggtt ttctgaaagc tcaagcactc acacaaaaaa ccaatgattc cctaaggcga
781 acccgtctga ttctcttcgt tctgctgctg ttcggcattt atggacttct aaaaaaccca
841 tttttatctg tccgcttccg gacaacaaca gggcttgatt ctgcagtaga tcctgtccag
901 atgaaaaatg tcacctttga acatgttaaa ggggtggagg aagctaaaca agaattacag
961 gaagttgttg aattcttgaa aaatccacaa aaatttacta ttcttggagg taaacttcca
1021 aaaggaattc ttttagttgg acccccaggg actggaaaga cacttcttgc ccgagctgtg
1081 gcgggagaag ctgatgttcc tttttattat gcttctggat ccgaatttga tgagatgttt
1141 gtgggtgtgg gagccagccg tatcagaaat ctttttaggg aagcaaaggc gaatgctcct
1201 tgtgttatat ttattgatga attagattct gttggtggga agagaattga atctccaatg
1261 catccatatt caaggcagac cataaatcaa cttcttgctg aaatggatgg ttttaaaccc
1321 aatgaaggag ttatcataat aggagccaca aacttcccag aggcattaga taatgcctta
1381 atacgtcctg gtcgttttga catgcaagtt acagttccaa ggccagatgt aaaaggtcga
1441 acagaaattt tgaaatggta tctcaataaa ataaagtttg atcaatccgt tgatccagaa
1501 attatagctc gaggtactgt tggcttttcc ggagcagagt tggagaatct tgtgaaccag
1561 gctgcattaa aagcagctgt tgatggaaaa gaaatggtta ccatgaagga gctggagttt
1621 tccaaagaca aaattctaat ggggcctgaa agaagaagtg tggaaattga taacaaaaac
1681 aaaaccatca cagcatatca tgaatctggt catgccatta ttgcatatta cacaaaagat
1741 gcaatgccta tcaacaaagc tacaatcatg ccacgggggc caacacttgg acatgtgtcc
1801 ctgttacctg agaatgacag atggaatgaa actagagccc agctgcttgc acaaatggat
1861 gttagtatgg gaggaagagt ggcagaggag cttatatttg gaaccgacca tattacaaca
1921 ggtgcttcca gtgattttga taatgccact aaaatagcaa agcggatggt taccaaattt
1981 ggaatgagtg aaaagcttgg agttatgacc tacagtgata cagggaaact aagtccagaa
2041 acccaatctg ccatcgaaca agaaataaga atccttctaa gggactcata tgaacgagca
2101 aaacatatct tgaaaactca tgcaaaggag cataagaatc tcgcagaagc tttattgacc
2161 tatgagactt tggatgccaa agagattcaa attgttcttg aggggaaaaa gttggaagtg
2221 agatgataac tctcttgata tggatgcttg ctggttttat tgcaagaata caagtagcat
2281 tgcagtagtc tacttttaca acgctttccc ctcattcttg atgtggtgta attgaagggt
2341 gtgaaatgct ttgtcaatca tttgtcacat ttatccagtt tgggttattc tcattatgac
2401 acctattgca aattagcatc ccatggcaaa tatattttga aaaaataaag aactatcagg
2461 attgaaaac
//