LOCUS AK297956 1509 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60736 complete cds, highly similar to RNA
polymerase II elongation factor ELL2.
ACCESSION AK297956
VERSION AK297956.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1509)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1509
/cell_type="dermal papilla cells (HDPC)"
/clone="HHDPC2005031"
/clone_lib="HHDPC2"
/db_xref="H-InvDB:HIT000492580"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, dermal papilla cells"
/organism="Homo sapiens"
CDS 130..1302
/codon_start=1
/note="highly similar to RNA polymerase II elongation
factor ELL2"
/protein_id="BAG60269.1"
/transl_table=1
/translation="MAAGGTGGLREEQRYGLSCGRLGQDNITVLHVKLTETAIRALET
YQSHKNLIPFRPSIQFQGLHGLVKIPKNDPLNEVHNFNFYLSNVGKDNPQGSFDCIQQ
TFSSSGASQLNCLGFIQDKITVCATNDSYQMTRERMTQIVNSNSNSPSTPEGRGTQDL
PVDSFSQNDSIYEDQQDKYTSRTSLETLPPGSVLLKCPKPMEENHSMSHKKSKKKSKK
HKEKDQIKKHDIETIEEKEEDLKREEEIAKLNNSSPNSSGGVKEDCTASMEPSAIELP
DYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLSPGSK
EYQNVHEEVLQEYQKIKQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQQQAESWS"
BASE COUNT 476 a 344 c 341 g 348 t
ORIGIN
1 atatatgaca gtacgtcagc agcgggatgg ccctagcagt ggcggcggct gcagaagccc
61 aagcagccgc ggccgcagtg gaggctagag ccggagcggc ggcggcggcg gcaccccggg
121 gagtttaaga tggcggcggg ggggacaggg ggcctgcggg aggagcagcg ctatgggctg
181 tcgtgcggac ggctggggca ggacaacatc accgtactgc atgtgaagct caccgagacg
241 gcgatccggg cgctcgagac ttaccagagc cacaagaatt taattccttt tcgaccttca
301 atccagttcc aaggactcca cgggcttgtc aaaattccca aaaatgatcc cctcaatgaa
361 gttcataact ttaactttta tttgtcaaat gtgggcaaag acaaccctca gggcagcttt
421 gactgcatcc agcaaacatt ctccagctct ggagcctccc agctcaattg cctgggattt
481 atacaagata aaattacagt gtgtgcaaca aacgactcgt atcagatgac acgagaaaga
541 atgactcaga ttgtaaattc taactccaac tcccctagca ctccagaagg ccgggggact
601 caagacctac ctgttgacag ttttagtcaa aacgatagta tctatgagga ccagcaagac
661 aaatatacct ctaggacttc tctggaaacc ttaccccctg gttccgttct actaaagtgt
721 ccaaagccta tggaagaaaa ccattcaatg tctcacaaaa agtccaaaaa gaagtctaaa
781 aaacataagg aaaaggacca aataaaaaag cacgacattg agactattga ggaaaaggag
841 gaagatctta agagagaaga ggaaattgcc aagctaaata actccagtcc aaattccagt
901 ggaggagtta aagaggattg cactgcctcc atggaacctt cagcaattga actcccagat
961 tatttgataa aatatatcgc tatcgtctcc tatgagcaac gccagaatta taaggatgac
1021 ttcaatgcag agtatgatga gtacagagct ttgcatgcca ggatggagac tgtagctaga
1081 agatttatca aactagatgc acaaagaaag cgcctttctc caggctcaaa agagtatcag
1141 aatgttcatg aagaagtctt acaagaatat cagaagataa agcagtctag tcccaattac
1201 catgaagaaa aatacagatg tgaatatctt cataacaagc tggctcacat caaaaggcta
1261 ataggtgaat ttgaccaaca gcaagcagag tcatggtcct agaactctgc ttggaccaga
1321 agatgtgaat aaacttaagc ttatttattt aaaattccaa atgagttgct ctagattcta
1381 aaaaggtgaa actttggctg ttgaaagttt cagtattagt aaacttgagt tactttttct
1441 tttccatttt actttgcttc cctgcatttc gaagctgctc tttctggtcc tccccaccac
1501 cccaccccc
//