LOCUS AK297911 1782 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59038 complete cds, highly similar to
Otoconin 90 precursor.
ACCESSION AK297911
VERSION AK297911.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1782)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1782
/clone="HEMBA1003374"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000492535"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 88..1521
/codon_start=1
/note="highly similar to Otoconin 90 precursor"
/protein_id="BAG60230.1"
/transl_table=1
/translation="MIAFLLTSVLMIPHAGGHPLDTPHLPQELPPGLPNNINITFFSG
MFKNVESVAEIFDCLGPHFTWLQAVFTNFPVLIQFVNGMKCVAGLCPRDFEDYGCTCR
FEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQDPAKLSTEVDCVGKKIICESKDNCEH
LLCTCDKAAIECLARSSLNSSLNLLDTSFCLAQTPETTIKEDLTTLLPRVVPVEPTDT
SLTALSGEEAGHDQEGVGAARATSPPGSAEIVATRVTAKIVTLVPAGIKSLGLAVSSV
ENDPEETTEKACDRFTFLHLGSGDNMQVMPQLGEMLFCLTSRCPEEFESYGCYCGQEG
RGEPRDDLDRCCLSHHCCLEQVRRLGCLLERLPWSPVVCVDHTPKCGGQSLCEKLLCA
CDQTAAECMTSASFNQSLKSPSRLGCPGQPAACEDSLHPVPAAPTLGSSSEEDSEEDP
PQEDLGRAKRFLRKSLGPLGIGPLHGR"
BASE COUNT 394 a 499 c 474 g 415 t
ORIGIN
1 agcatcattc atccagctgc actccagtgg agccttcacg gagtctgttc cagttgctgc
61 ctaagcccca tcctttgttc tcctgctatg attgcgtttc tcctcaccag tgtgctgatg
121 atcccccatg ccggaggcca tcctctggac actccacatc ttccacagga gctgcctcca
181 ggactcccaa acaatatcaa tatcactttc ttcagtggga tgtttaaaaa tgtggaaagt
241 gtggctgaaa tttttgattg cctgggcccc cacttcacct ggctgcaggc tgtcttcacc
301 aatttccctg tgctgatcca gtttgtcaat ggtatgaagt gtgtggctgg tctctgcccc
361 cgagactttg aagactatgg ttgcacctgc aggtttgaga tggaagggtt gcctgtggat
421 gaatctgaca gctgctgctt ccagcaccgc aggtgctatg aggaggccgc tgagatggac
481 tgtctccaag accccgccaa acttagcaca gaggtcgatt gtgtcggcaa gaagatcata
541 tgtgagtcca aggacaactg tgagcacctg ctgtgtacct gtgataaggc tgccatagag
601 tgcttggctc gatccagcct caactcttcc ctgaaccttc tggacacctc cttctgcctg
661 gctcagactc cagagacaac catcaaggaa gacttgacaa cacttctgcc cagagtggtt
721 cctgtggagc ccacagacac cagcctgaca gccctttcag gagaagaagc aggccacgat
781 caggaaggag tgggagctgc tagggctacg tcccctccag gatctgcaga gatagttgca
841 acaagggtta cagctaaaat tgtaaccctt gtccctgctg gcattaaatc tctggggctg
901 gcagtgtcat ctgttgaaaa tgatcctgag gagaccactg aaaaagcctg tgacagattc
961 accttcctgc acctgggaag tggggacaac atgcaggtga tgccacagct tggagagatg
1021 ctcttttgtc tgacatcccg gtgcccggag gaatttgagt cttatggctg ttactgtgga
1081 caagaaggaa gaggcgagcc aagggatgac ctagacaggt gctgcttgtc ccatcactgc
1141 tgcctagagc aagtgagaag gctgggctgc ctgcttgaga ggcttccttg gtcaccggtg
1201 gtgtgtgtgg atcatacgcc caagtgtggg ggccaaagcc tgtgtgagaa gttgctctgt
1261 gcctgtgacc agacggcagc tgagtgcatg acctctgcct cctttaacca aagcctcaag
1321 tccccaagca gactcgggtg ccctgggcag ccagcagcct gtgaagacag cctgcaccct
1381 gtgcccgcag cccccaccct gggctccagc tctgaggagg acagcgagga ggaccctcca
1441 caggaggacc tcggcagagc caagaggttt ctgcggaagt cactgggtcc cttggggatc
1501 gggcctcttc atggaagata gatgcccaga gaaaatggct aacaccttca gtagcgtggc
1561 tcctgctcca ccttcagctc tttatctctc agcctcctct gtcccttgga gccttcttcc
1621 cttcctttaa ctcagaggcg gggagggaac agaggccgtg agccctgccc atgcctcatc
1681 agctgtggtc acctcacaag ccaatgtaca cttggagaag gcacaccatg gtacctccat
1741 gctcctttag tgcactgtgg aagctcaata aatactccaa tc
//