LOCUS AK297899 2021 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57539 complete cds, highly similar to Zinc
finger protein GLI1.
ACCESSION AK297899
VERSION AK297899.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2021)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2021
/clone="HEMBA1000087"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000492523"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 259..1983
/codon_start=1
/note="highly similar to Zinc finger protein GLI1"
/protein_id="BAG60219.1"
/transl_table=1
/translation="MSPSLGFPAQMNHQKGPSPSFGVQPCGPHDSARGGMIPHPQSRG
PFPTCQLKSELDMLVGKCREEPLEGDMSSPNSTGIQDPLLGMLDGREDLEREEKREPE
SVYETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYML
VVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNAS
DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLP
RAPSISTVEPKREREGGPIREESRLTVPEGAMKPHPQPLFSHYPQPSPPQYLQSGPYT
QPPPDYLPSEPRPCLDFDSPTHSTGQLKAQLVCNYVQSQQELLWEGGGREDAPAQEPS
YQSPKFLGGSQVSPSRAKAPVNTYGPGFGPNLPNHKSGSYPTPSPCHENFVVGANRAS
HRAAAPPRLLPPLPTCYGPLKVGGTNPSCGHPEVGRLGGGPALYPPPEGQVCNPLDSL
DLDNTQLDFVAILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAVGNMSVLLRSLPGE
TEFLNSSA"
BASE COUNT 454 a 642 c 525 g 400 t
ORIGIN
1 accgcacacc ccccagccca gactccagcc ctggaccgcg catcccgagc ccagcgccca
61 gacagaggcc cactcttttc ttctccccgg agtgcagtca agttgaccaa gaagcgggca
121 ctgtccatct cacctctgtc ggatgccagc ctggacctgc agacggttat ccgcacctca
181 cccagctccc tcgtagcttt catcaactcg cgatgcacat ctccaggagg ctcctacggt
241 catctctcca ttggcaccat gagcccatct ctgggattcc cagcccagat gaatcaccaa
301 aaagggccct cgccttcctt tggggtccag ccttgtggtc cccatgactc tgcccggggt
361 gggatgatcc cacatcctca gtcccgggga cccttcccaa cttgccagct gaagtctgag
421 ctggacatgc tggttggcaa gtgccgggag gaacccttgg aaggtgatat gtccagcccc
481 aactccacag gcatacagga tcccctgttg gggatgctgg atgggcggga ggacctcgag
541 agagaggaga agcgtgagcc tgaatctgtg tatgaaactg actgccgttg ggatggctgc
601 agccaggaat ttgactccca agagcagctg gtgcaccaca tcaacagcga gcacatccac
661 ggggagcgga aggagttcgt gtgccactgg gggggctgct ccagggagct gaggcccttc
721 aaagcccagt acatgctggt ggttcacatg cgcagacaca ctggcgagaa gccacacaag
781 tgcacgtttg aagggtgccg gaagtcatac tcacgcctcg aaaacctgaa gacgcacctg
841 cggtcacaca cgggtgagaa gccatacatg tgtgagcacg agggctgcag taaagccttc
901 agcaatgcca gtgaccgagc caagcaccag aatcggaccc attccaatga gaagccgtat
961 gtatgtaagc tccctggctg caccaaacgc tatacagatc ctagctcgct gcgaaaacat
1021 gtcaagacag tgcatggtcc tgacgcccat gtgaccaaac ggcaccgtgg ggatggcccc
1081 ctgcctcggg caccatccat ttctacagtg gagcccaaga gggagcggga aggaggtccc
1141 atcagggagg aaagcagact gactgtgcca gagggtgcca tgaagccaca tccacagcct
1201 ctcttttccc attaccccca gccctctcct ccccaatatc tccagtcagg cccctatacc
1261 cagccacccc ctgattatct tccttcagaa cccaggcctt gcctggactt tgattccccc
1321 acccattcca cagggcagct caaggctcag cttgtgtgta attatgttca atctcaacag
1381 gagctactgt gggagggtgg gggcagggaa gatgcccccg cccaggaacc ttcctaccag
1441 agtcccaagt ttctgggggg ttcccaggtt agcccaagcc gtgctaaagc tccagtgaac
1501 acatatggac ctggctttgg acccaacttg cccaatcaca agtcaggttc ctatcccacc
1561 ccttcaccat gccatgaaaa ttttgtagtg ggggcaaata gggcttcaca tagggcagca
1621 gcaccacctc gacttctgcc cccattgccc acttgctatg ggcctctcaa agtgggaggc
1681 acaaacccca gctgtggtca tcctgaggtg ggcaggctag gagggggtcc tgccttgtac
1741 cctcctcccg aaggacaggt atgtaacccc ctggactctc ttgatcttga caacactcag
1801 ctggactttg tggccattct ggatgagccc caggggctga gtcctcctcc ttcccatgat
1861 cagcggggca gctctggaca taccccacct ccctctgggc cccccaacat ggctgtgggc
1921 aacatgagtg tcttactgag atccctacct ggggaaacag aattcctcaa ctctagtgcc
1981 taaagagtag ggaatctcat ccatcacaga tcgcatttcc t
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