LOCUS AK297880 1468 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52708 complete cds, highly similar to Basigin
precursor.
ACCESSION AK297880
VERSION AK297880.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1468)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1468
/clone="HEART2009012"
/clone_lib="HEART2"
/db_xref="H-InvDB:HIT000492504"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="heart"
CDS 40..1197
/codon_start=1
/note="highly similar to Basigin precursor"
/protein_id="BAG60203.1"
/transl_table=1
/translation="MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHC
EAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEED
TGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLN
DSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLH
GPPRVKAVKTSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFV
SSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAE
VLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS"
BASE COUNT 284 a 472 c 448 g 264 t
ORIGIN
1 agcggttgga ggttgtagga ccggcgagga ataggaatca tggcggctgc gctgttcgtg
61 ctgctgggat tcgcgctgct gggcacccac ggagcctccg gggctgccgg cttcgtccag
121 gcgccgctgt cccagcagag gtgggtgggg ggcagtgtgg agctgcactg cgaggccgtg
181 ggcagcccgg tgcccgagat ccagtggtgg tttgaagggc agggtcccaa cgacacctgc
241 tcccagctct gggacggcgc ccggctggac cgcgtccaca tccacgccac ctaccaccag
301 cacgcggcca gcaccatctc catcgacacg ctcgtggagg aggacacggg cacttacgag
361 tgccgggcca gcaacgaccc ggatcgcaac cacctgaccc gggcgcccag ggtcaagtgg
421 gtccgcgccc aggcagtcgt gctagtcctg gaacccggca cagtcttcac taccgtagaa
481 gaccttggct ccaagatact cctcacctgc tccttgaatg acagcgccac agaggtcaca
541 gggcaccgct ggctgaaggg gggcgtggtg ctgaaggagg acgcgctgcc cggccagaaa
601 acggagttca aggtggactc cgacgaccag tggggagagt actcctgcgt cttcctcccc
661 gagcccatgg gcacggccaa catccagctc cacgggcctc ccagagtgaa ggctgtgaag
721 acgtcagaac acatcaacga gggggagacg gccatgctgg tctgcaagtc agagtccgtg
781 ccacctgtca ctgactgggc ctggtacaag atcactgact ctgaggacaa ggccctcatg
841 aacggctccg agagcaggtt cttcgtgagt tcctcgcagg gccggtcaga gctacacatt
901 gagaacctga acatggaggc cgaccccggc cagtaccggt gcaacggcac cagctccaag
961 ggctccgacc aggccatcat cacgctccgc gtgcgcagcc acctggccgc cctctggccc
1021 ttcctgggca tcgtggctga ggtgctggtg ctggtcacca tcatcttcat ctacgagaag
1081 cgccggaagc ccgaggacgt cctggatgat gacgacgccg gctctgcacc cctgaagagc
1141 agcgggcagc accagaatga caaaggcaag aacgtccgcc agaggaactc ttcctgaggc
1201 aggtggcccg aggacgctcc ctgctccgcg tctgcgccgc cgccggagtc cactcccagt
1261 gcttgcaaga ttccaagttc tcacctctta aagaaaaccc accccgtaga ttcccatcat
1321 acacttcctt cttttttaaa aaagttgggt tttctccatt caggattctg tcccttaggt
1381 ttttttcctt ctgaagtgtt tcacgagagc ccgggagctg ctgccctgcg gccccgtctg
1441 tggctttcag cctctgggtc tgagtcat
//