LOCUS AK297868 1485 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55760 complete cds, highly similar to Squalene synthetase (EC 2.5.1.21). ACCESSION AK297868 VERSION AK297868.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1485) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1485 /clone="HEART2007436" /clone_lib="HEART2" /db_xref="H-InvDB:HIT000492492" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="heart" CDS 51..1475 /codon_start=1 /note="highly similar to Squalene synthetase (EC 2.5.1.21)" /protein_id="BAG60195.1" /transl_table=1 /translation="MAAAACGTKAMALFKRTLVLSPAAAPRGPGAGTAPRGCCLPPAA WPCKDWPRGEGGRLWSRLPQSHSHSHSHSHSCSSTSPTAVCVVCPQDSLSSSLKTCYK YLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSF LYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKH VTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRD YLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYL SRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVK AIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLL AALSWQYLTTLSQVTEDYVQTGEH" BASE COUNT 351 a 414 c 380 g 340 t ORIGIN 1 agatctgctt gagtctatgg aggaaaaact ccgcggggtc cgcgattccc atggccgcag 61 ccgcctgcgg caccaaggcc atggccctct tcaagcgcac cttggtgctg agtcccgccg 121 cggcgcccag gggcccgggc gcaggcaccg ccccgcgggg ctgctgcttg cctcctgccg 181 cctggccctg caaggactgg cctcggggag agggcggcag gctgtggagc cgcctgcccc 241 agtcccactc ccactcccac tcccactccc actcctgctc ctcgacgtct cccaccgccg 301 tgtgtgttgt ctgcccgcag gactcgctca gcagcagcct gaaaacttgc tacaagtatc 361 tcaatcagac cagtcgcagt ttcgcagctg ttatccaggc gctggatggg gaaatgcgca 421 acgcagtgtg catattttat ctggttctcc gagctctgga cacactggaa gatgacatga 481 ccatcagtgt ggaaaagaag gtcccgctgt tacacaactt tcactctttc ctttaccaac 541 cagactggcg gttcatggag agcaaggaga aggatcgcca ggtgctggag gacttcccaa 601 cgatctccct tgagtttaga aatctggctg agaaatacca aacagtgatt gccgacattt 661 gccggagaat gggcattggg atggcagagt ttttggataa gcatgtgacc tctgaacagg 721 agtgggacaa gtactgccac tatgttgctg ggctggtcgg aattggcctt tcccgtcttt 781 tctcagcctc agagtttgaa gaccccttag ttggtgaaga tacagaacgt gccaactcta 841 tgggcctgtt tctgcagaaa acaaacatca tccgtgacta tctggaagac cagcaaggag 901 gaagagagtt ctggcctcaa gaggtttgga gcaggtatgt taagaagtta ggggattttg 961 ctaagccgga gaatattgac ttggccgtgc agtgcctgaa tgaacttata accaatgcac 1021 tgcaccacat cccagatgtc atcacctacc tttcgagact cagaaaccag agtgtgttta 1081 acttctgtgc tattccacag gtgatggcca ttgccacttt ggctgcctgt tataataacc 1141 agcaggtgtt caaaggggca gtgaagattc ggaaagggca agcagtgacc ctgatgatgg 1201 atgccaccaa tatgccagct gtcaaagcca tcatatatca gtatatggaa gagatttatc 1261 atagaatccc cgactcagac ccatcttcta gcaaaacaag gcagatcatc tccaccatcc 1321 ggacgcagaa tcttcccaac tgtcagctga tttcccgaag ccactactcc cccatctacc 1381 tgtcgtttgt catgcttttg gctgccctga gctggcagta cctgaccact ctctcccagg 1441 taacagaaga ctatgttcag actggagaac actgatccca aattt //