LOCUS AK297822 1392 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52958 complete cds, highly similar to Homo
sapiens DEP domain containing 6 (DEPDC6), mRNA.
ACCESSION AK297822
VERSION AK297822.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1392)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1392
/clone="HEART2000260"
/clone_lib="HEART2"
/db_xref="H-InvDB:HIT000492446"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="heart"
CDS 126..1052
/codon_start=1
/note="highly similar to Homo sapiens DEP domain
containing 6 (DEPDC6), mRNA"
/protein_id="BAG60159.1"
/transl_table=1
/translation="MEEGGSTGSAGSDSSTSGSGGAQQRELERMAEVLVTGEQLRLMS
PENTLLQPREEEGVKYERTFMASEFLDWLVQEGEATTRKEAEQLCHRLMEHGIIQHVS
SKHPFVDSNLLYQFRMNFRRRRRLMELLNEKSPSSQETHDSPFCLRKQSHDNRKSTSF
MSVSPSKEIKIVSAVRRSSMSSCGSSGYFSSSPTLSSSPPVLCNPKSVLKRPVTSEEL
LTPGAPYARKTFTIVGDAVGWGFVVRGSKPCHIQAVDPSGPAAAAGMKVCQFVVSVNG
LNVLHVDYRTVSNLILTGPRTIVMEVMEELEC"
BASE COUNT 349 a 354 c 400 g 289 t
ORIGIN
1 agtcagagca gcggagctgc cccgaacaaa gatggcgcgg gaagcgtctg tgagggcaga
61 ctgatccgag cacccaaacc ctcggcggac agcggagcca gtggtagccg cacggcccta
121 aaaccatgga ggagggcggc agcactggca gtgctggcag tgacagcagc accagcggga
181 gtggcggggc gcagcaaagg gagctggagc gcatggctga ggtcttggtc accggggaac
241 agctacggct gatgagccct gaaaacacac tcctgcagcc cagggaggag gaaggggtca
301 agtatgagcg caccttcatg gcatctgaat tcctggactg gctggttcag gaaggtgagg
361 ccaccacgag gaaagaggca gagcagcttt gccaccggct tatggagcat ggcatcatcc
421 agcatgtgtc cagcaagcac ccatttgtgg acagcaatct tctctaccag ttcagaatga
481 acttccggcg gaggcgaaga ctgatggagc tgctcaatga aaagtccccc tcctcccagg
541 aaactcatga cagtcccttc tgcctgagga agcagagcca tgacaatcgg aaatctacca
601 gctttatgtc agtgagcccc agcaaggaga tcaagatcgt gtctgcagtg aggagaagca
661 gcatgagcag ctgtggcagc agcggctact tcagcagcag ccccaccctc agcagcagcc
721 cccctgtgct ctgcaacccc aagtccgtgc tgaagagacc tgtcacctct gaggaactcc
781 ttactcccgg ggctccgtat gcaaggaaga cattcacgat tgttggtgac gcggttggct
841 ggggttttgt ggtgcgagga agtaagccat gccacatcca ggctgtagac cccagtggcc
901 ctgcagccgc agcaggaatg aaggtctgtc agtttgtcgt ctctgtcaac gggctcaatg
961 tcctgcatgt agactaccgg accgtgagca atctgattct gacgggccca cggacgattg
1021 tcatggaagt catggaggag ttagagtgct gagctcctgg gcctcccagc cctccagtgg
1081 cctgtgggtg agggaagcca gaatgacaca aagcaatgca aagacaagat tgccatgcaa
1141 atggatggtt ttggacatac gagtcttctc cgcacataca tgtctaaagt tgagttttat
1201 acactgaatg tggaagaacc gggtatcata tcttttttaa aaaatgtcag tgtagaaaac
1261 atttgggaaa ccattttcct acatgataga actgccttac tagatttcta tttgtagctc
1321 tcattcattg ttttttatct tagtttgcag aaaggtgttg aaatgcttct ctagcccaaa
1381 cagcgacatg ct
//