LOCUS       AK297809                2854 bp    mRNA    linear   HUM 31-JUL-2008
DEFINITION  Homo sapiens cDNA FLJ54369 complete cds, highly similar to Itchy
            homolog E3 ubiquitin protein ligase (EC 6.3.2.-).
ACCESSION   AK297809
VERSION     AK297809.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..2854
                     /cell_type="chondrocytes (HC)"
                     /clone="HCHON2008922"
                     /clone_lib="HCHON2"
                     /db_xref="H-InvDB:HIT000492433"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /note="primary culture, chondrocytes"
                     /organism="Homo sapiens"
     CDS             176..2620
                     /codon_start=1
                     /note="highly similar to Itchy homolog E3 ubiquitin
                     protein ligase (EC 6.3.2.-)"
                     /protein_id="BAG60147.1"
                     /transl_table=1
                     /translation="MSDSGSQLGSMGSLTMKSQLQITVISAKLKENKKNWFGPSPYVE
                     VTVDGQSKKTEKCNNTNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLESEVVT
                     NGETTCSESASQNDDGSRSKDETRVSTNGSDDPEDAGAGENRRVSGNNSPSLSNGGFK
                     PSRPPRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLII
                     PLTISGGSGPRPLNPVTQAPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWE
                     RRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQ
                     DLFATSQSKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLP
                     EGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFWC
                     QQLAMPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWF
                     FLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFI
                     DTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILG
                     EIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQ
                     YFDAKELEVLLCGMQEIDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQ
                     FVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLK
                     EKLLFAIEETEGFGQE"
BASE COUNT          896 a          568 c          648 g          742 t
ORIGIN      
        1 agtagctgtg gtcggggctc gggaccggct gccatcttag tctagggact gaggagtcgc
       61 cgccgccccg agtcccggta ccatgcattt cacagtggcc ttgtggagac aacgccttaa
      121 cccaaggaag tgactcaaac tgtgagaact tcaggttttc caacctattg gtggtatgtc
      181 tgacagtgga tcacaacttg gttcaatggg tagcctcacc atgaaatcac agcttcagat
      241 cactgtcatc tcagcaaaac ttaaggaaaa taagaagaat tggtttggac caagtcctta
      301 cgtagaggtc acagtagatg gacagtcaaa gaagacagaa aaatgcaaca acacaaacaa
      361 tatgaaactt gaagaagtag ttgtgacttt gcagcttgga ggtgacaaag agccaacaga
      421 gacaatagga gacttgtcaa tttgtcttga tgggctacag ttagagtctg aagttgttac
      481 caatggtgaa actacatgtt cagaaagtgc ttctcagaat gatgatggct ccagatccaa
      541 ggatgaaaca agagtgagca caaatggatc agatgaccct gaagatgcag gagctggtga
      601 aaataggaga gtcagtggga ataattctcc atcactctca aatggtggtt ttaaaccttc
      661 tagacctcca agaccttcac gaccaccacc acccacccca cgtagaccag catctgtcaa
      721 tggttcacca tctgccactt ctgaaagtga tgggtctagt acaggctctc tgccgccgac
      781 aaatacaaat acaaatacat ctgaaggagc aacatctgga ttaataattc ctcttactat
      841 atctggaggc tcaggcccta ggccattaaa tcctgtaact caagctccct tgccacctgg
      901 ttgggagcag agagtggacc agcacgggcg agtttactat gtagatcatg ttgagaaaag
      961 aacaacatgg gatagaccag aacctctacc tcctggctgg gaacggcggg ttgacaacat
     1021 gggacgtatt tattatgttg accatttcac aagaacaaca acgtggcaga ggccaacact
     1081 ggaatccgtc cggaactatg aacaatggca gctacagcgt agtcagcttc aaggagcaat
     1141 gcagcagttt aaccagagat tcatttatgg gaatcaagat ttatttgcta catcacaaag
     1201 taaagaattt gatcctcttg gtccattgcc acctggatgg gagaagagaa cagacagcaa
     1261 tggcagagta tatttcgtca accacaacac acgaattaca caatgggaag accccagaag
     1321 tcaaggtcaa ttaaatgaaa agcccttacc tgaaggttgg gaaatgagat tcacagtgga
     1381 tggaattcca tattttgtgg accacaatag aagaactacc acctatatag atccccgcac
     1441 aggaaaatct gccctagaca atggacctca gatagcctat gttcgggact tcaaagcaaa
     1501 ggttcagtat ttccggttct ggtgtcagca actggccatg ccacagcaca taaagattac
     1561 agtgacaaga aaaacattgt ttgaggattc ctttcaacag ataatgagct tcagtcccca
     1621 agatctgcga agacgtttgt gggtgatttt tccaggagaa gaaggtttag attatggagg
     1681 tgtagcaaga gaatggttct ttcttttgtc acatgaagtg ttgaacccaa tgtattgcct
     1741 gtttgaatat gcagggaagg ataactactg cttgcagata aaccccgctt cttacatcaa
     1801 tccagatcac ctgaaatatt ttcgttttat tggcagattt attgccatgg ctctgttcca
     1861 tgggaaattc atagacacgg gtttttcttt accattctat aagcgtatct tgaacaaacc
     1921 agttggactc aaggatttag aatctattga tccagaattt tacaattctc tcatctgggt
     1981 taaggaaaac aatattgagg aatgtgattt ggaaatgtac ttctccgttg acaaagaaat
     2041 tctaggtgaa attaagagtc atgatctgaa acctaatggt ggcaatattc ttgtaacaga
     2101 agaaaataaa gaggaataca tcagaatggt agctgagtgg aggttgtctc gaggtgttga
     2161 agaacagaca caagctttct ttgaaggctt taatgaaatt cttccccagc aatatttgca
     2221 atactttgat gcaaaggaat tagaggtcct tttatgtgga atgcaagaga ttgatttgaa
     2281 tgactggcaa agacatgcca tctaccgtca ttatgcaagg accagcaaac aaatcatgtg
     2341 gttttggcag tttgttaaag aaattgataa tgagaagaga atgagacttc tgcagtttgt
     2401 tactggaacc tgccgattgc cagtaggagg atttgctgat ctcatgggga gcaatggacc
     2461 acagaaattc tgcattgaaa aagttgggaa agaaaattgg ctacccagaa gtcatacctg
     2521 ttttaatcgc ctggacctgc caccatacaa gagctatgag caactgaagg aaaagctgtt
     2581 gtttgccata gaagaaacag aaggatttgg acaagagtaa cttctgagaa cttgcaccat
     2641 gaatgggcaa gaacttattt gcaatgtttg tccttctctg cctgttgcac atcttgtaaa
     2701 attggacaat ggctctttag agagttatct gagtgtaagt aaattaatgt tctcatttag
     2761 atttatctcc cagtgatttc tactcagcgt ttccagaaat caggtctgca aatgactagt
     2821 cagaaccttg cttaacatga gattttaaca caac
//