LOCUS AK297807 1781 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60726 complete cds, highly similar to
Transcriptional regulator ERG.
ACCESSION AK297807
VERSION AK297807.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1781
/cell_type="chondrocytes (HC)"
/clone="HCHON2008606"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000492431"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 273..1733
/codon_start=1
/note="highly similar to Transcriptional regulator ERG"
/protein_id="BAG60145.1"
/transl_table=1
/translation="MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASS
SSDYGQTSKMSPRVPQQDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVG
SPDTVGMNYGSYMEEKHMPPPNMTTNERRVIVPPDPTLWSTDHVRQWLEWAVKEYGLP
DVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKA
LQNSPRLMHARNTGGAAFIFPNTSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQ
SKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNS
SCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKR
YAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSS
SFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY"
BASE COUNT 466 a 530 c 440 g 345 t
ORIGIN
1 gttttcactt ggtcggaatg gggagagtgt gcaagagatc gctgcgggac aggttcctag
61 agatcgctcc gggacggtcg tgacggcccc cgagggacat gagagaagag gagcggcgct
121 caggttattc caggatcttt ggagacccga ggaaagccgt gttgaccaaa agcaagacaa
181 atgactcaca gggaaaaaag atggcagaac caagggcaac taaagccgtc aggttctgaa
241 cagctggtag atgggctggc ttactgaagg acatgattca gactgtcccg gacccagcag
301 ctcatatcaa ggaagcctta tcagttgtga gtgaggacca gtcgttgttt gagtgtgcct
361 acggaacgcc acacctggct aagacagaga tgaccgcgtc ctcctccagc gactatggac
421 agacttccaa gatgagccca cgcgtccctc agcaggattg gctgtctcaa cccccagcca
481 gggtcaccat caaaatggaa tgtaacccta gccaggtgaa tggctcaagg aactctcctg
541 atgaatgcag tgtggccaaa ggcgggaaga tggtgggcag cccagacacc gttgggatga
601 actacggcag ctacatggag gagaagcaca tgccaccccc aaacatgacc acgaacgagc
661 gcagagttat cgtgccacca gatcctacgc tatggagtac agaccatgtg cggcagtggc
721 tggagtgggc ggtgaaagaa tatggccttc cagacgtcaa catcttgtta ttccagaaca
781 tcgatgggaa ggaactgtgc aagatgacca aggacgactt ccagaggctc acccccagct
841 acaacgccga catccttctc tcacatctcc actacctcag agagactcct cttccacatt
901 tgacttcaga tgatgttgat aaagccttac aaaactctcc acggttaatg catgctagaa
961 acacaggggg tgcagctttt attttcccaa atacttcagt atatcctgaa gctacgcaaa
1021 gaattacaac taggccagat ttaccatatg agccccccag gagatcagcc tggaccggtc
1081 acggccaccc cacgccccag tcgaaagctg ctcaaccatc tccttccaca gtgcccaaaa
1141 ctgaagacca gcgtcctcag ttagatcctt atcagattct tggaccaaca agtagccgcc
1201 ttgcaaatcc aggcagtggc cagatccagc tttggcagtt cctcctggag ctcctgtcgg
1261 acagctccaa ctccagctgc atcacctggg aaggcaccaa cggggagttc aagatgacgg
1321 atcccgacga ggtggcccgg cgctggggag agcggaagag caaacccaac atgaactacg
1381 ataagctcag ccgcgccctc cgttactact atgacaagaa catcatgacc aaggtccatg
1441 ggaagcgcta cgcctacaag ttcgacttcc acgggatcgc ccaggccctc cagccccacc
1501 ccccggagtc atctctgtac aagtacccct cagacctccc gtacatgggc tcctatcacg
1561 cccacccaca gaagatgaac tttgtggcgc cccaccctcc agccctcccc gtgacatctt
1621 ccagtttttt tgctgcccca aacccatact ggaattcacc aactgggggt atatacccca
1681 acactaggct ccctaccagc catatgcctt ctcatctggg cacttactac taaagacctg
1741 gcggaggctt ttcccatcag cgtgcattca ccagcccatc g
//