LOCUS AK297802 1358 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51254 complete cds, highly similar to
Dystroglycan precursor.
ACCESSION AK297802
VERSION AK297802.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1358)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1358
/cell_type="chondrocytes (HC)"
/clone="HCHON2007956"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000492426"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 178..606
/codon_start=1
/note="highly similar to Dystroglycan precursor"
/protein_id="BAG60140.1"
/transl_table=1
/translation="MTPKQRIDLLHRMRSFSEVELHNMKLVPVVNNRLFDMSAFMAGP
GNAKKVVENGALLSWKLGCSLNQNSVPDIHGVEAPAREGAMSAQLGYPVVGWHIANKK
PALSGPPKPQSSWRDFGDFFIFIFCLTAFGLFIENSSLHF"
BASE COUNT 302 a 330 c 356 g 370 t
ORIGIN
1 agccacatcc cccagacctc cagtgtgttc tccatcgagg tctaccctga agaccacagt
61 gagctgcagt cggtgaggac agcctcccca gaccctggtg aggtggtatc atctgcctgt
121 gctgcggatg aacctgtgac tgttttgacg gtgattttgg atgccgacct caccaagatg
181 accccaaagc aaaggattga cctcctgcac aggatgcgga gcttctcaga agtagagctt
241 cacaacatga aattagtgcc ggtggtgaat aacagactat ttgacatgtc ggccttcatg
301 gctggcccgg gaaatgcaaa aaaggtggtg gagaatgggg cccttctctc ctggaagctg
361 ggctgctccc tgaaccagaa cagtgtgcct gacattcatg gtgtagaggc ccctgccagg
421 gagggcgcaa tgtctgctca gcttggctac cctgtggtgg gttggcacat cgccaataag
481 aagcccgccc tctctggtcc tcccaaaccc caaagcagct ggagagactt tggggacttt
541 tttattttta ttttttgcct aacagctttt ggtttgttca tagagaactc ttcgcttcat
601 ttttgatggc tggctctgaa agcaccatgt ggagtggagg tggagggagc gaggaaccat
661 gaatgaactc gcaggcagtg ccgggcggcc ccctggctct ctgcgttttg cctttaacac
721 taactgtact gttttttcta ttcacgtgtg tctagctgca ggatgtaaca tggaaaacag
781 taactaaaga ttaaattcaa aggactttca gaagttaagg ttaagttttt acgtttaatc
841 tgctgtttac ctaaacttgt atgtataatt tttgggtggg tatggggaat tgctttgcta
901 aaaataagct cccagggtgt ttcaaactta gagaagacca agggacagta ttttttatca
961 aaggaatact attttttcac actacgtcaa cttggttgct ctgatacccc agagcctgat
1021 tgggggcctc ccggccctgg ctcacgccaa gtccctggtg ctgggtttgc tctcccgctg
1081 ttgccagggg ctggaagctg gaggggtctc ttgggccatg gacatcccca cttccagccc
1141 atgtacacta gtggcccacg accaaggggt cttcatttcc atgaaaaagg gactccaaga
1201 ggcagtggtg gctgtggccc ccaactttgg tgctccaggg tgggccagct gcttgtgggg
1261 gcacctggga ggtcaaaggt ctccaccaca tcaacctatt ttgttttacc ctttttctgt
1321 gcattgtttt tttttttcct cctaaaagga atatcacg
//