LOCUS AK297796 2180 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51000 complete cds, highly similar to DnaJ
homolog subfamily B member 6.
ACCESSION AK297796
VERSION AK297796.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2180)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2180
/cell_type="chondrocytes (HC)"
/clone="HCHON2006749"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000492420"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 193..1026
/codon_start=1
/note="highly similar to DnaJ homolog subfamily B member
6"
/protein_id="BAG60135.1"
/transl_table=1
/translation="MPHPRILKRPKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTF
RNPDDVFREFFGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFG
SGFSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGNFKSISTSTKMVNGRKITTKRIV
ENGQERVEVEEDGQLKSLTINGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPAS
LLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAGLKEGGKRKKQKQREESKKKKSTKGN
H"
BASE COUNT 518 a 529 c 574 g 559 t
ORIGIN
1 ggagaaagga gagaaaggaa agcgcgagga gccgccgcca ccaccagcgc agcagtcctg
61 gagctgtgag gagattcggg ccgtcaccct gcctcccctg cgtcccgcca ccggccgctt
121 ctgtcctcgg acccattcca acaatctcgt aaaacatggt ggattactat gaagttctag
181 gcgtgcagag acatgcctca cccgaggata ttaaaaaggc ctaagaaacg ggacatctat
241 gacaagtatg gcaaagaagg attaaatggt ggaggaggag gtggaagtca ttttgacagt
301 ccatttgaat ttggcttcac attccgtaac ccagatgatg tcttcaggga attttttggt
361 ggaagggacc cattttcatt tgacttcttt gaagaccctt ttgaggactt ctttgggaat
421 cgaaggggtc cccgaggaag cagaagccga gggacggggt cgtttttctc tgcgttcagt
481 ggatttccgt cttttggaag tggattttct tcttttgata caggatttac ttcatttggg
541 tcactaggtc acgggggcct cacttcattc tcttccacgt catttggtgg tagtggcatg
601 ggcaacttca aatcgatatc aacttcaact aaaatggtta atggcagaaa aatcactaca
661 aagagaattg tcgagaacgg tcaagaaaga gtagaagttg aagaagatgg ccagttaaag
721 tccttaacaa taaatggtgt ggccgacgac gatgccctcg ctgaggagcg catgcggaga
781 ggccagaacg ccctgccagc ccagcctgcc ggcctccgcc cgccgaagcc gccccggcct
841 gcctcgctgc tgagacacgc gcctcactgt ctctctgagg aggagggcga gcaggaccga
901 cctcgggcac ccgggccctg ggaccccctc gcgtccgcag caggattgaa agaaggtggc
961 aagaggaaga agcagaagca gagagaggag tcgaagaaga agaagtcgac caaaggcaat
1021 cactagaccg gacttgaggc acgcggtgca cccccagacg ctggcgctcc accgtgctcg
1081 gcatgcggtc gtgcacacgc gctaggtagc agcgtcggtc aggactgtct cgaggccaca
1141 ctcgctcggc aggattatgc gatcacggat cagtcagagc agggtcagga gacggggctg
1201 acggcacggg tggcggggac agacgtttgg gacttggccg cgactctctg cttctctcca
1261 gctctcaatc tgctgcattt tcctctagtg cttccggatc ctcttcattc ttttcggcta
1321 ctcaaccact ccgcatgctg ctggaatatt tctggcttta gaagtacagg agggcgcaga
1381 tggctaactg agtaacattc atgaaatgag gctttctgtg gcggcgtagt gtttggaatt
1441 agaaggtaat tcagtagagt gtaacttaga gaatattgca agtgacacat tgaatcctgc
1501 ccgtcagggc accttttcct cagagcaatc cggccacacg aatagaaggc tgtcgtgaat
1561 cacatcagat gtaaaatcat tccttctgtt tactctttta attttcatcc tttgcaggta
1621 gtgcaaattc aacttcaaat atggtgtagg ttttgctaga ttccatattt ttttcttgga
1681 tttttgctaa ttatttttag caaaaaattt ttgctcagtg gcaccctccc tagtgtccat
1741 gggttagggc catgctgggg aaaacgggcc ggtatttaca cacgcgcaaa acacccagag
1801 acggcacaag gaggttgaac tcatgtttca gttcgcgaac attgactcct tacgaaagtc
1861 acttcattct aactagatgc gcccacttcc ggtcattatt tcgtttgcat gatgtattgc
1921 ttcttcacgt tttgttttta ttgagcacgg agtagaattc cagggctgcc ttgacttctt
1981 ccctgcatgc tccctcccag tgactttcct tccctttcac atgaggatct gccgttcatg
2041 ttgctttctc ctttgtcctc ttggacttga gggcattgtg aaaagctttg ctgtgattta
2101 aaaatgccag caattttaat ctagcagtgt tgaagctggg aattttttgg cgcaatccat
2161 gtagcagtga cccaggcttg
//