LOCUS AK297781 1414 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55112 complete cds.
ACCESSION AK297781
VERSION AK297781.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1414)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1414
/cell_type="chondrocytes (HC)"
/clone="HCHON2004520"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000492405"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 279..1271
/codon_start=1
/protein_id="BAG60125.1"
/transl_table=1
/translation="MGHVKLVSSPGRSEAETVDEPVSEGADDSLDEFRINILSLDGLA
PAVSENSDLEQEEESAQRQKTAGKIFRAEASTGQDAPRQAQARSWASQGKAASAEGDE
SEVSEHLSASSASAIQQDSTSSMQPPSEAPMVNTVSSAYSEDFENSPSLTASEPTAHS
KESLDRTLDALSESSSSVKTDLPQTAESRKKSGRHVTRVLVKDTAVQTPDPAFTYEWT
KVASMAAMGPALGGAYVDPTPIANHVISADAIEALTAYSPAVLALHDVLKQQLSLTQQ
FIQASRHLHASLLRSLDADSFHYHTLEEAKEYIRCHRPAPLTMEDALEEVNKEL"
BASE COUNT 362 a 391 c 392 g 269 t
ORIGIN
1 gtagtctctt ctgctctggc tctgttgccc agggcaaccg ctccttcagg cctgaatgtg
61 gcggctgcct ctgcgaatgg acggcgtggg aagagaatgg cttctgcaag gaaagccagc
121 cgtcccatgc gtgatgtttt tggtgacttc agtgatgttt ccttggaaga ttcaacaatg
181 gaagaaatca gaaacttcca gatcagtaga aatcttacca aaatagcacc tggtcatagc
241 agatttctaa aaagaaacca aactcagtgt ctttaaagat ggggcatgtc aagcttgtgt
301 cctccccggg aaggagtgag gctgagactg tggacgagcc agtctcagaa ggtgctgatg
361 acagcctcga cgagtttaga ataaatattt tatcgcttga cggtctggct ccagctgtca
421 gtgagaactc cgatttggaa caggaagagg aaagtgctca gagacaaaaa acagctggca
481 aaatcttcag agccgaggcg tccactgggc aggatgcccc gaggcaggcc caggcgagga
541 gctgggcatc acagggaaag gccgcctctg cagaggggga tgagagcgag gtctcggagc
601 atctcagtgc cagctcggct tctgccatcc agcaggacag cacttccagc atgcagccac
661 catctgaagc ccccatggtg aacacagtca gctcagctta ttcggaggat tttgaaaact
721 ctccaagtct gacagcatct gagccaaccg cccattccaa ggagtctctt gacagaacac
781 tggacgcttt gtctgaatcc tcttcaagtg tgaagacaga ccttccacaa acagccgagt
841 ctaggaaaaa gtcgggcagg cacgtgacaa gagtgcttgt gaaggacaca gctgtgcaga
901 cgccagatcc tgccttcacc tacgagtgga ccaaggtggc cagcatggca gccatggggc
961 ctgccctggg aggcgcctac gtggacccga cacccatcgc caatcatgtt atcagtgcag
1021 atgcaataga agccctgacc gcttacagcc cggccgtgct ggcactccat gatgtgctga
1081 agcagcagct gagcctgacg cagcagttca tccaggccag ccggcacctg cacgcctccc
1141 tcctgcgctc cctggacgcg gactccttcc actaccacac cctggaggaa gccaaagagt
1201 acattaggtg ccacagacct gccccactga ccatggagga tgccctggag gaggtgaaca
1261 aggagctgtg agcgccagca ggtggagctt gacgtgacgt cttaacaaaa gcaaagcacc
1321 gcagcttccc agagttacca gcgcagcact taagacagga tccgagccaa tgccgcactc
1381 atgaagctgg cccagctgga aacccggatc atga
//