LOCUS AK297773 1560 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ52700 complete cds, highly similar to Protein
neurobeachin.
ACCESSION AK297773
VERSION AK297773.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1560)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1560
/cell_type="chondrocytes (HC)"
/clone="HCHON2003401"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000492397"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 225..1058
/codon_start=1
/note="highly similar to Protein neurobeachin"
/protein_id="BAH12663.1"
/transl_table=1
/translation="MFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVV
YSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGR
TYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWED
DQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQ
RDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPPWAKNLKTLCGSTGW
P"
BASE COUNT 440 a 363 c 342 g 415 t
ORIGIN
1 aggattgcga agaatggctc cctttgggga aactttacag aaaacattta ggcccagtgg
61 ttctcagcac ccctgcccag ctcatcgctc ccgtggtggt ggccaagggg actctctcca
121 tcaccacgac agaaatctac ttcgaggtag atgaggatga ttctgccttc aagaagatcg
181 acacgaaagt tcttgcatac actgagggac ttcacggaaa atggatgttc agcgagatac
241 gagctgtatt ttcaagacgt taccttctac aaaacactgc tttggaagta tttatggcaa
301 accgaacctc agttatgttt aatttccctg atcaagcaac agtaaaaaaa gttgtctata
361 gcttgcctcg ggttggagta gggaccagct atggtctgcc acaagccagg aggatatcat
421 tggccactcc tcgacagctt tataaatctt ccaatatgac tcagcgctgg caaagaaggg
481 aaatttcaaa cttcgaatat ttgatgttcc ttaatactat tgcaggacgg acatataatg
541 atctgaacca atatccagtg tttccgtggg tgttaaccaa ctatgaatca gaagagttgg
601 acctgactct tccaggaaac ttcagggatc tatcaaagcc aattggtgct ttgaacccca
661 agagagctgt gttttatgca gagcgttatg agacatggga agatgatcaa agcccaccct
721 accattataa tacccattat tcaacagcaa catctacttt atcctggctt gttcgaattg
781 aacctttcac aaccttcttc ctcaatgcaa atgatggaaa atttgatcat ccagatcgaa
841 ccttctcatc cgttgcaagg tcttggagaa ctagtcagag agatacttct gatgtaaagg
901 aactaattcc agagttctac tacctaccag agatgtttgt caacagtaat ggatataatc
961 ttggagtcag agaagatgaa gtagtggtaa atgatgttga tcttccccct tgggcaaaaa
1021 acctgaagac tttgtgcgga tcaacaggat ggccctagaa agtgaatttg tttcttgcca
1081 acttcatcag tggatcgacc ttatatttgg ctataagcag cgaggaccag aagcagttcg
1141 tgctctgaat gtttttcact acttgactta tgaaggctct gtgaacctgg atagtatcac
1201 tgatcctgtg ctcagggagg ccatggaggc acagatacag aactttggac agacgccatc
1261 tcagttgctt attgagccac atccgcctcg gagctctgcc atgcacctgt gtttccttcc
1321 acagagtccg ctcatgttta aagatcagat gcaacaggat gtgataatgg tgctgaagtt
1381 tccttcaaat tctccagtaa cccatgtggc agccaacact ctgccccact tgaccatccc
1441 cgcagtggtg acagtgactt gcagccgact ctttgcagtg aatagatggc acaacacagt
1501 aggcctcaga ggagctccag gatactcctt ggatcaagcc caccatcttc ccattgaaat
//