LOCUS AK297770 1432 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55111 complete cds, highly similar to Sorting and assembly machinery component 50 homolog. ACCESSION AK297770 VERSION AK297770.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1432) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1432 /cell_type="chondrocytes (HC)" /clone="HCHON2002894" /clone_lib="HCHON2" /db_xref="H-InvDB:HIT000492394" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, chondrocytes" /organism="Homo sapiens" CDS 511..1290 /codon_start=1 /note="highly similar to Sorting and assembly machinery component 50 homolog" /protein_id="BAG60116.1" /transl_table=1 /translation="MSAEYSFPIWKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSL KSSLSHAMVIDSRNSSILPRRGALLKVNQELAGYTGGDVSFIKEDFELQLNKQLIFDS VFSASFWGGMLVPIGDKPSSIADRFYLGGPTSVRGFSMHSIGPQSEGDYLGGEAYWAG GLHLYTPLPFRPGQGGFGELFRTHFFLNAGNLCNLNYGEGPKAHIRKLAECIRWSYGA GIVLRLGNIARLELNYCVPMGVQTGDRICDGVQFGAGIRFL" BASE COUNT 370 a 327 c 385 g 350 t ORIGIN 1 agctctgcga cgcagcggct ggagagggaa ccatggggac tgtgcacgcc cggagtttgg 61 agcctcttcc atcaagtgga cctgattttg gaggattagg agaagaagct gaatttgttg 121 aagttgagcc tgaagctaaa caggaaattc ttgaaaacaa agatgtggtt gttcaacatg 181 ttcattttga tggacttgga aggactaaag atgatatcat catttgtgaa attggagatg 241 ttttcaaggc caaaaaccta attgaggtaa tgcggaaatc tcatgaagcc cgtgaaaaat 301 tgctccgtct tggaattttt agacaagtgg atgttttgat tgacacatgt caaggtgacc 361 tttcagtttt cctatggaac aaaagaaact tcgtatggcc tgtccttctt caaaccacgg 421 cccggaaact tcgaaagaaa tttctctgta aacttatata aagttactgg acagttccct 481 tggagctcac tgcgggagac ggacagagga atgtcagctg agtacagttt tcccatatgg 541 aagaccagcc acactgtcaa gtgggaaggc gtatggcgag aactgggctg cctctcaagg 601 acggcgtcgt ttgctgttcg aaaagaaagc ggacattcac tgaaatcatc tctttcgcat 661 gccatggtca tcgattctcg gaattcttcc atcttaccaa ggagaggtgc tttgctgaaa 721 gttaaccagg aactggcagg ctacactggc ggggatgtga gcttcatcaa agaagatttt 781 gaacttcagt tgaacaagca actcatattt gattcagttt tttcagcgtc tttctggggc 841 ggaatgttgg tacccattgg tgataagccg tcaagcattg ctgataggtt ttacctcggg 901 ggacccacaa gcgtccgcgg attcagcatg cacagcatcg ggccacagag cgaaggagac 961 tacctaggtg gagaagcgta ctgggccggc ggcctgcacc tctacacccc attacctttc 1021 cggccaggcc agggtggctt tggagaactt ttccgaacac acttctttct caacgcagga 1081 aacctctgca acctcaacta tggggagggc cccaaagctc atattcgtaa gctggctgag 1141 tgcatccgct ggtcgtacgg ggccgggatt gtcctcaggc ttggcaacat cgctcggttg 1201 gaacttaatt actgcgtccc catgggagta cagacaggcg acaggatatg tgatggcgtc 1261 cagtttggag ctgggataag gttcctgtag ccgacacccc tacaggagaa gctctgggac 1321 tggggcagca gcaaggcgcc catgccacac accgtctctc gaggaaacgc ggttcagcga 1381 ttctttgact gcggaccctg tgggaaaccc cgtcaataaa tgttaaagac ac //