LOCUS AK297749 1441 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52337 complete cds, highly similar to Protein
DEK.
ACCESSION AK297749
VERSION AK297749.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1441)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1441
/cell_type="coronary artery smooth muscle cells (HCASMC)"
/clone="HCASM2008302"
/clone_lib="HCASM2"
/db_xref="H-InvDB:HIT000492373"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, coronary artery smooth muscle
cells"
/organism="Homo sapiens"
CDS 167..1192
/codon_start=1
/note="highly similar to Protein DEK"
/protein_id="BAG60099.1"
/transl_table=1
/translation="MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEE
EEEKGKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFE
KGSVQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLP
KSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNKEESSDDEDKESE
EEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDE
PLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKT
TVKELIS"
BASE COUNT 503 a 264 c 340 g 334 t
ORIGIN
1 attttgaaaa tcttgttgat tctggggagc cgagcgcgcg gcgcgagcgt cacgccagac
61 agcggcccgc gcgccttctc ctcggcgtcg gccgccgccg cctcccagaa cctcctcgtg
121 ccctcgcgtg ccaggcccgc ggcggccgaa atccgcggtt cacagcatgt ccgcctcggc
181 ccctgctgcg gagggggagg gaacccccac ccagcccgcg tccgagaaag aacccgaaat
241 gcccggtccc agagaggaga gcgaggagga agaggacgag gacgacgagg aggaggagga
301 ggaggaaaaa ggaaaggggc agaaactttg tgaaattgag aggatacatt tttttctaag
361 taagaagaaa accgatgaac ttagaaatct acacaaactg ctttacaaca ggccaggcac
421 tgtgtcctca ttaaagaaga atgtgggtca gttcagtggc tttccatttg aaaaaggaag
481 tgtccaatat aaaaagaagg aagaaatgtt gaaaaaattt agaaatgcca tgttaaagag
541 catctgtgag gttcttgatt tggagagatc aggtgtaaat agtgaactag tgaagaggat
601 cttgaatttc ttaatgcatc caaagccttc tggcaaacca ttgccgaaat ctaaaaaaac
661 ttgtagcaaa ggcagtaaaa aggaacggaa cagttctgga atggcaagga aggctaagcg
721 aaccaaatgt cctgaaattc tgtcagatga atctagtagt gatgaagatg aaaagaaaaa
781 caaggaagag tcttcagatg atgaagataa agaaagtgaa gaggagccac caaaaaagac
841 agccaaaaga gaaaaaccta aacagaaagc tacttctaaa agtaaaaaat ctgtgaaaag
901 tgccaatgtt aagaaagcag atagcagcac caccaagaag aatcaaaaca gttccaaaaa
961 agaaagtgag tctgaggata gttcagatga tgaaccttta attaaaaagt tgaagaaacc
1021 ccctacagat gaagagttaa aggaaacaat aaagaaatta ctggccagtg ctaacttgga
1081 agaagtcaca atgaaacaga tttgcaaaaa ggtctatgaa aattatccta cttatgattt
1141 aactgaaaga aaagatttca taaaaacaac tgtaaaagag ctaatttctt gagatagagg
1201 acagagaaga tgactcgttc ccatagattt gaagatctga tttataccat tataccagca
1261 aagagaatgt atttcctttt ctaaatcctt gttaagcaac gttagtagaa cttactgctg
1321 acctttttat cttgagtgtt atgtgaattt gagtttgctg ttttaaattg catttctatg
1381 ccatttttag tttaaaatct tgcatggcat taattgttcc ttgcttttat agttgtattt
1441 t
//