LOCUS AK297722 2210 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58108 complete cds, highly similar to Homo
sapiens FERM domain containing 3 (FRMD3), mRNA.
ACCESSION AK297722
VERSION AK297722.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2210)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2210
/cell_type="coronary artery smooth muscle cells (HCASMC)"
/clone="HCASM2002814"
/clone_lib="HCASM2"
/db_xref="H-InvDB:HIT000492346"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, coronary artery smooth muscle
cells"
/organism="Homo sapiens"
CDS 121..1914
/codon_start=1
/note="highly similar to Homo sapiens FERM domain
containing 3 (FRMD3), mRNA"
/protein_id="BAG60076.1"
/transl_table=1
/translation="MFASCHCVPRGRRTMKMIHFRSSSVKSLSQEMRCTIRLLDDSEI
SCHIQRETKGQFLIDHICNYYSLLEKDYFGIRYVDPEKQRHWLEPNKSIFKQMKTHPP
YTMCFRVKFYPHEPLKIKEELTRYLLYLQIKRDIFHGRLLCSFSDAAYLGACIVQAEL
GDYDPDEHPENYISEFEIFPKQSQKLERKIVEIHKNELRGQSPPVAEFNLLLKAHTLE
TYGVDPHPCKDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKLKFEGKTFYVIGT
QKEKKAMLAFHTSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSSKIFFKGSRFRYS
GKVAKEVVEASSKIQREPPEVHRANITQSRSSHSLNKQLIINMEPLQPLLPSPSEQEE
ELPLGEGVPLPKEENISAPLISSSPVKAAREYEDPPSEEEDKIKEEPLTISELVYNPS
ASLLPTPVDDDEIDMLFDCPSRLELEREDTDSFEDLEADENAFLIAEEEELKEARRAL
SWSYDILTGHIRVNPLVKSFSRLLVVGLGLLLFVFPLLLLLLESGIDLSFLCEIRQTP
EFEQFHYEYYCPLKEWVAGKVHLILYMLGCS"
BASE COUNT 598 a 527 c 515 g 570 t
ORIGIN
1 gatgtcccgg ggctgagccg cgcccaggtg tcccggacag tgcgtgcgag cgtgtgtgtc
61 cgcgcaggcg agcaccgcgc cggccctgag cctcccgctc gctccccccg gccgcggtgc
121 atgttcgcct cctgccactg tgtgccgaga ggcaggagga ccatgaaaat gatccacttt
181 cggagctcca gcgtcaaatc gctcagccag gagatgagat gcaccatccg gctgctggac
241 gactcggaga tctcctgcca catccagagg gaaaccaaag ggcagtttct cattgaccac
301 atctgcaact actacagcct gctggagaag gactactttg gcattcgcta tgtggaccca
361 gagaagcaaa ggcactggct tgaacctaac aagtccatct tcaagcaaat gaaaactcat
421 ccaccataca ccatgtgctt tagagtgaaa ttctacccac atgaaccctt gaagattaaa
481 gaagagctca caagatacct tttatacctt cagattaaaa gggacatttt tcatggccgc
541 ctgctgtgct ccttttctga tgctgcctac ctgggtgcct gtattgttca agctgagctt
601 ggtgattacg atcctgatga gcatcctgag aattacatca gtgagtttga gattttcccc
661 aagcagtcac agaagctgga aagaaaaata gtggaaattc ataaaaatga actcaggggg
721 cagagcccac cagttgctga atttaacttg ctcctgaaag ctcacacttt ggaaacctac
781 ggggtggatc ctcacccatg caaggattca acaggcacaa caacattttt aggattcaca
841 gctgcaggct ttgtggtctt tcagggaaat aagagaatcc atttgataaa atggccagat
901 gtctgcaaat tgaagtttga agggaagaca ttttatgtga ttggcaccca gaaggagaaa
961 aaagccatgt tggcattcca tacttcaaca ccagctgcct gcaaacatct ttggaagtgt
1021 ggagtggaaa accaggcctt ttataagtat gcaaaatcca gtcagatcaa gactgtatca
1081 agcagcaaga tattttttaa aggaagtaga tttcgatata gtgggaaagt tgccaaagag
1141 gtggtggagg ccagttccaa gatccagagg gagcctcctg aggtgcacag agccaacatt
1201 actcagagcc gcagttccca ctccttgaac aaacagctca tcattaacat ggaacccctg
1261 cagcccctgc ttccttcccc cagcgagcaa gaagaagaac ttcctctggg tgagggtgtt
1321 ccattgccta aagaggagaa catttctgct cccttgatct ccagctcccc agtgaaggca
1381 gcccgggagt atgaagatcc ccctagtgaa gaggaagata aaataaaaga agaaccttta
1441 accatctctg aactagtgta caacccaagt gccagcctgc tccccacccc tgtggatgac
1501 gatgagattg acatgctctt tgactgtcct tctaggcttg agttggaaag agaagacaca
1561 gattcatttg aggatctgga agcagatgaa aacgcctttt tgattgctga agaagaggag
1621 ctgaaggagg ctcgccgtgc tttgtcgtgg agctatgaca ttctgactgg ccatattcgg
1681 gtgaacccac tggtcaagag tttttccagg ctccttgtgg tgggcctggg actgctgctc
1741 tttgtatttc ccctgctcct cctccttttg gagtcaggta ttgatctctc cttcttatgc
1801 gaaatccgcc agacaccaga gtttgagcag tttcactatg aatactactg tcccctcaag
1861 gagtgggtgg ctgggaaagt ccacctcatc ctctacatgc tgggttgctc atgaagttaa
1921 tctctcacgt gactaagggc tatattcaat gctagtgatt tctttttttc agcaaatgcc
1981 tggttctgaa gggtcacggg gctgtcaaca ggtgttcctt actcataatt gattattcaa
2041 acctttaagt tagctttcca taattcactg cacttaaata agtttaaatc aaatacagtt
2101 attttagtta caggttagga agatggtctt taaataacca aaaatatgtt tatttttatt
2161 atagtgtaga catacccttc atctattata tcataataca tgttacattg
//