LOCUS AK297707 2534 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60716 complete cds, highly similar to Homo
sapiens Rho guanine nucleotide exchange factor (GEF) 19
(ARHGEF19), mRNA.
ACCESSION AK297707
VERSION AK297707.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2534)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2534
/clone="FELNG2002698"
/clone_lib="FELNG2"
/db_xref="H-InvDB:HIT000492331"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="lung"
CDS 200..1774
/codon_start=1
/note="highly similar to Homo sapiens Rho guanine
nucleotide exchange factor (GEF) 19 (ARHGEF19), mRNA"
/protein_id="BAG60064.1"
/transl_table=1
/translation="MDCGPPATLQPHLTGPPGTAHHPVAVCQQESLSFAELPALKPPS
PVCLDLFPVAPEELRAPGSRWSLGTPAPLQGLLWPLSPGGSDTEITSGGMRPSRAGSW
PHCPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRKMRVYQREEVPGCPEAHAVFL
EPGQVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSASELMTRLHSSLRLGRNSAAR
ALISGSGTGAAREGKASGMEARSVEMSGDRVSRPAPGDSREGDWSEPRLDTQEEPPLG
SRSTNERRQSRFLLNSVLYQEYSDVASARELRRQQREEEGPGDEAEGAEEGPGPPRAN
LSPSSSFRAQRSARGSTFSLWQDIPDVRGSGVLATLSLRDCKLQEAKFELITSEASYI
HSLSVAVGHFLGSAELSECLGAQDKQWLFSKLPEVKSTSERFLQDLEQRLEADVLRFS
VCDVVLDHCPAFRRVYLPYVTNQAYQERTYQRLLLENPRFPGILARLEESPVCQRLPL
TSFLILQPPGGQGGHQ"
BASE COUNT 454 a 805 c 807 g 468 t
ORIGIN
1 acctccccct ccctgcccca cacaataccc aggagcttgc cttgctcggc tctggggcca
61 tgctgacatg ctgacatcgc cccctgagga cttggctgca accccagagc ccccagggtg
121 tcccggagcc ctggaccgtg ctggcagctg gacggagctc cctggctgag ggccaggtgg
181 gtggcagagc aaaagaggaa tggactgtgg gccacctgct accctccagc cccacctgac
241 tgggccacct ggcactgccc accaccctgt agcagtgtgc cagcaggaga gtctgtcctt
301 tgcagagctg cccgccctga agcccccgag cccagtgtgt ctggaccttt tccctgttgc
361 cccagaggag cttcgggctc ctggcagccg ctggtccctg gggacccctg cccctctcca
421 agggttgcta tggccattat ccccaggagg ctcagataca gagatcacca gcggggggat
481 gcggcccagc agggctggca gctggccaca ctgtcctggt gcccagcccc cagctctgga
541 gggaccctgg agtccccgac acacacagcc acagcgccgg gccagccacg gctcggagaa
601 gaagtctgcc tggcgcaaga tgcgggtgta ccagcgtgaa gaggtccccg gctgccccga
661 ggcccacgct gtcttcctag agcctggcca ggtagtgcaa gagcaggccc tgagcacaga
721 ggagcccagg gtggagttgt ctgggtccac ccgagtgagc ctcgaaggtc ctgagcggag
781 gcgcttctcg gcatcggagc tgatgacccg gctgcactct tctctgcgcc tggggcggaa
841 ttcagcagcc cgggcactca tctctgggtc aggcaccgga gcagcccggg aagggaaagc
901 atctggaatg gaggctcgaa gtgtagagat gagcggggac cgggtgtcgc ggccagcccc
961 tggtgactca cgagagggcg attggtccga gcccaggcta gacacacagg aagagccgcc
1021 tttggggtcc aggagcacca acgagcggcg ccagtctcga ttcctcctta actccgtcct
1081 ctatcaggaa tacagcgacg tggccagcgc ccgcgaactg cggcggcagc agcgcgagga
1141 ggagggcccg ggggacgagg ccgagggcgc agaggagggg ccggggccgc cgcgggccaa
1201 cctctccccc agcagctcct tccgggcgca gcgctcggcg cgaggctcca ccttctcgct
1261 gtggcaggat atccccgacg tacgcggcag cggcgtcctg gccacgctga gcctgcggga
1321 ctgcaagctg caggaggcca agtttgagct gatcacctcc gaggcctcct atatccacag
1381 cctgtcggtg gctgtgggcc acttcttagg ctctgccgag ctgagcgagt gtctgggggc
1441 gcaggacaag cagtggctgt tttccaaact gcccgaggtc aagagcacca gcgagaggtt
1501 cctgcaggac ctggagcagc ggctggaggc agatgtgctg cgcttcagcg tgtgcgacgt
1561 ggtgctggac cactgcccgg ccttccgcag agtctacctg ccctatgtca ccaaccaggc
1621 ctaccaggag cgcacctacc agcgcctgct cctggagaac cccaggttcc ctggcatcct
1681 ggctcgcctg gaggagtctc ctgtgtgcca gcgtctgccc cttacctcct tccttatcct
1741 ccagccccca ggaggacaag gaggtcatca gtgaggggga agattgcccc caggttcagt
1801 gtgttaggac atacaaggca ctgcacccag atgagctgac cttggagaag actgacatcc
1861 tgtcagtgag gacctggacc agtgacggct ggctggaagg ggtccgcctg gcagatggtg
1921 agaaggggtg ggtgccccag gcctatgtgg aagagatcag cagcctcagc gcccgcctcc
1981 gaaacctccg ggagaataag cgagtcacaa gtgccaccag caaactgggg gaggctcctg
2041 tgtgatgggc agccatggcc taggacccca cctccatgcc tggctcctgg atggtcctgg
2101 aggggcctgc agtgtctcca ttccccaagc tgctcctgct ggcacttcgc ttctgtggcc
2161 ttggcattga gggcacaggc tggacacagg aatgggggcg cctccagagg gtctctccgt
2221 cctcatgctc ctcagtgtcc acacttcaag gccaaggata gtttcttcct ctgacatggg
2281 gaccataaca ggtgatcact gatacctggc aaagactggg gccctctcct ttctatgtcc
2341 tcaatcctgc ctgactcttg gtccttctgg cagggacctg gctggggaac gttctggtgc
2401 tgatggtgct gggacctata tgtatattta tatatatctg gggtcttgtc taccacctcc
2461 cctggtcaga gcctgagtgg gtgctggttg ctgtgtcttg tctgtaaata aactcctatc
2521 atgcctttgc ttgg
//