LOCUS AK297637 2608 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59351 complete cds, highly similar to
Striatin-4.
ACCESSION AK297637
VERSION AK297637.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2608)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2608
/clone="FEBRA2024651"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000492261"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 370..2274
/codon_start=1
/note="highly similar to Striatin-4"
/protein_id="BAG60009.1"
/transl_table=1
/translation="MLEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVT
LENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPR
APPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDED
DELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRC
TVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEDVFIMDTIGGG
EVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSAL
LTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGA
DACIHSWKIPDLSMDPYDGYDPCVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVR
IWDPSSSSPACLCTFPTASEHGVPTSAAFTSTEPAHIVASFRSGDTVLYDMEVGSALL
TLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCL
AVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASA
GADALAKVFV"
BASE COUNT 546 a 791 c 820 g 451 t
ORIGIN
1 accttagcaa ccttctcctg gtgcagagtc ctaagaggtt tggggctcca taaccacaaa
61 ggtggaagcg aggggaaggc tgctccccac cacctcgccc ccaccgctgg ggaagggtta
121 ccatgacaac caacctggcc ggcaatcaga gaggatgggg ccactgctgg tcgccctttc
181 tctcagagta aaagtaattg tccaggagag tggtgtttgg gtgtggaagg gcacgagtgg
241 gcgcgcttcg aagccgagaa agcccgctgg gaggccgagc gcgccgagtt acaggctcag
301 gtggccttcc ttcagggaga gaggaaaggg caggagaatc taaagacgga cctggtgcgg
361 cggatcaaga tgctagagta tgcgctgaag caggaaaggg ccaaatatca taaactgaag
421 tttgggacag acctgaacca gggggagaag aaagcagatg tgtcagaaca agtctccaat
481 ggccccgtgg aatcggtcac cctggagaac agcccgttgg tgtggaagga ggggcggcag
541 cttctccgac agtacctgga agaggtgggc tacacagaca ccatcctcga catgcggtcc
601 aagcgcgtcc gttccctgct gggccgctcg ctggagctca acggggcagt ggagccgagt
661 gaaggggccc ccagggctcc accaggccct gcagggctca gtggtgggga gtcgctgctg
721 gtgaaacaga tcgaggagca gataaagagg aacgcggcag gcaaagatgg caaagagcgc
781 ttgggcggct cagtgctggg gcagatcccc ttcctgcaga actgcgagga cgaagacagc
841 gacgaggacg atgagctgga cagcgtgcag cacaagaagc agcgtgtgaa gctcccatcc
901 aaggctctgg tgcccgaaat ggaagacgag gatgaggaag acgactctga ggatgctatc
961 aatgagtttg atttcctggg ctcaggagag gatggggaag gggctccaga ccctcggcgg
1021 tgcactgtgg atgggagccc ccatgagctg gaaagccgtc gggtcaaact ccaaggcatt
1081 ctggctgacc tgcgggatgt ggatgggctg cccccaaaag tgactggccc gcctcctggc
1141 acaccccagc cccggccaca tgaagacgtc ttcatcatgg acactatcgg gggcggggag
1201 gtgagcctgg gggacttggc agatctcacc gtcaccaacg acaacgacct cagctgcgat
1261 ctgtctgaca gcaaagatgc ttttaagaag acgtggaacc ccaagttcac cctgcgctcg
1321 cactacgacg gcattcgttc cctggccttc caccacagcc agtcggctct gctcaccgcc
1381 tccgaggacg gcacgctcaa gctctggaac ctgcagaagg cggtcacggc caagaagaat
1441 gcggcgctag atgtggaacc tatacatgct ttccgggctc acaggggccc agtgttggct
1501 gtggctatgg gcagcaacag tgaatactgc tacagtggcg gggcagatgc ctgcatccat
1561 agttggaaga ttccagacct cagcatggat ccctatgatg gctacgaccc atgcgtgctg
1621 agccacgtcc tggagggcca cggggacgcc gtgtggggcc tggccttcag tcccacctcc
1681 cagcgcctgg cctcctgttc tgctgatggc accgtccgca tctgggaccc cagcagcagc
1741 agcccggcct gcctctgcac cttccccaca gccagcgagc acggggtccc cacctcagcg
1801 gccttcacca gcaccgagcc tgcccacatc gtggcctcct tccgctctgg cgacaccgtc
1861 ttgtatgaca tggaggttgg cagtgccctc ctcacgctgg agtcccgggg cagcagcggt
1921 ccaacccaga tcaaccaagt ggtgagtcat ccaaaccagc ctctcaccat caccgcccac
1981 gacgacaggg gcatccgctt cctggacaat cggacaggta agccggtgca ctccatggtt
2041 gcacacctgg acgcagtcac ctgcctagcc gtggacccca acggcgcatt cctgatgtca
2101 ggaagccatg actgctccct gcgtctctgg agcctggaca acaaaacgtg cgtgcaggag
2161 atcacggccc accgcaagaa gcacgaggag gccatccacg ctgttgcctg ccaccccagc
2221 aaggccctca ttgccagtgc tggcgctgat gccctggcca aggtcttcgt atgatgccca
2281 cctggccctg ccctggccgc cacgctggct ggggtgtagg gccgggcagg tggggctgag
2341 gggactccca gcctcgctgg aggtgcagag gcctggcctc tgtctgtttg ccatggagcc
2401 tggtggtgct aacggccctt tccccaggaa tccctcccca acggctgcct tccccaagca
2461 tccagcctgg ggatgggccc ctttcaggaa tcacccccga ggatggcctc ggggtttccc
2521 cctgtgccct gacagccgct cctggtatca gagctgcttt ccagagggca gcacagccag
2581 ggccgggtgt ctttagggat cagttttt
//