LOCUS AK297588 1367 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51896 complete cds, highly similar to
Glia-derived nexin precursor.
ACCESSION AK297588
VERSION AK297588.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1367)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1367
/clone="FEBRA2018085"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000492212"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 238..1242
/codon_start=1
/note="highly similar to Glia-derived nexin precursor"
/protein_id="BAG59975.1"
/transl_table=1
/translation="MLQLGADGRTKKQLAMVMRYGVNGVGKILKKINKAIVSKKNKDI
VTVANAVFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNETRDMI
DNLLSPDLIDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQL
SVFRCGSTSAPNDLWYNFIELPYHGESISMLIALPTESSTPLSAIIPHISTKTIDSWM
SIMVPKRVQVILPKFTAVAQTDLKEPLKVLGITDMFDSSKANFAKITRSENLHVSHIL
QKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFIRHNPTGAVLFMGQINKP
"
BASE COUNT 363 a 343 c 321 g 340 t
ORIGIN
1 ttgcgctgtg gggctgcccg ggctgcgcgg cgtctgcagg cgccaccgct gcctctttcc
61 ggctgtgacc ctcctcgccg ccgccgcttg gctgcgtcct ccgactccca cttcaatcct
121 ctgtctctcg aggaactagg ctccaacacg gggatccagg ttttcaatca gattgtgaag
181 tcgaggcctc atgacaacat cgtgatctct ccccatggga ttgcgtcggt cctggggatg
241 cttcagctgg gggcggacgg caggaccaag aagcagctcg ccatggtgat gagatacggc
301 gtaaatggag ttggtaaaat attaaagaag atcaacaagg ccatcgtctc caagaagaat
361 aaagacattg tgacagtggc taacgccgtg tttgttaaga atgcctctga aattgaagtg
421 ccttttgtta caaggaacaa agatgtgttc cagtgtgagg tccggaatgt gaactttgag
481 gatccagcct ctgcctgtga ttccatcaat gcatgggtta aaaacgaaac cagggatatg
541 attgacaatc tgctgtcccc agatcttatt gatggtgtgc tcaccagact ggtcctcgtc
601 aacgcagtgt atttcaaggg tctgtggaaa tcacggttcc aacccgagaa cacaaagaaa
661 cgcactttcg tggcagccga cgggaaatcc tatcaagtgc caatgctggc ccagctctcc
721 gtgttccggt gtgggtcgac aagtgccccc aatgatttat ggtacaactt cattgaactg
781 ccctaccacg gggaaagcat cagcatgctg attgcactgc cgactgagag ctccactccg
841 ctgtctgcca tcatcccaca catcagcacc aagaccatag acagctggat gagcatcatg
901 gtgcccaaga gggtgcaggt gatcctgccc aagttcacag ctgtagcaca aacagatttg
961 aaggagccgc tgaaagttct tggcattact gacatgtttg attcatcaaa ggcaaatttt
1021 gcaaaaataa caaggtcaga aaacctccat gtttctcata tcttgcaaaa agcaaaaatt
1081 gaagtcagtg aagatggaac caaagcttca gcagcaacaa ctgcaattct cattgcaaga
1141 tcatcgcctc cctggtttat agtagacaga ccttttctgt ttttcatccg acataatcct
1201 acaggtgctg tgttattcat ggggcagata aacaaaccct gaagagtata caaaagaaac
1261 catgcaaagc aacgactact ttgctacgaa gaaagactcc tttcctgcat ctttcatagt
1321 tctgttaaat atttttgtac atcgcttctt tttcaaaact agttctt
//