LOCUS AK297564 2528 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53136 complete cds, highly similar to Homo
sapiens Vac14 homolog (VAC14), mRNA.
ACCESSION AK297564
VERSION AK297564.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2528)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2528
/clone="FEBRA2013223"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000492188"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 254..2392
/codon_start=1
/note="highly similar to Homo sapiens Vac14 homolog
(VAC14), mRNA"
/protein_id="BAG59956.1"
/transl_table=1
/translation="MNPEKDFAPLTPNIVRALNDKLIEPVLTCFNDADSRLRYYACEA
LYNIVKVARGAVLPHFNVLFDGLSKLAADPDPNVKSGSELLDRLLKDIVTESNKFDLV
SFIPLLRERIYSNNQYARQFIISWILVLESVPDINLLDYLPEILDGLFQILGDNGKEI
RKMCEVVLGEFLKEIKKNPSSVKFAEMANILVIHCQTTDDLIQLTAMCWMREFIQLAG
RVMLPYSSGILTAVLPCLAYDDRKKNSGIKEVANVCNQSLMKLVTPEDDELDELRPGQ
RQAEPTPDDALPKQEGTASGGPDGSCDSSFSSGISVFTAASTERAPVTLHLDGIVQVL
NCHLSDTAIGMMTRIAVLKWLYHLYIKTPRKMFRHTDSLFPILLQTLSDESDEVILKD
LEVLAEIASSPAGQTDDPGPLDGPDLQASHSELQVPTPGRAGLPNTSGTKGLECSPST
PTMNSYFYKFMINLLKRFSSERKLLEVRGPFIIRQLCLLLNAENIFHSMADILLREED
PKFASTMVHALNTILLTSTELFQLRNQLKDLKTLESQNLFCCLYRSWCHNPVTTVSLC
FLTQNYRHAYDLIQKFGDLEVTVDFLAEVDKLVQLIECPIFTYLRLQLLDVKNNPYLI
KALYGLLMLLPQSSAFQLLSHRLQCVPNPELLQTEDSLKAAPKSQKADSPSIDYAELL
QHFEKVQNKHLEVRHQRSGRGDHLDRRVVL"
BASE COUNT 549 a 793 c 712 g 474 t
ORIGIN
1 gagtaacatg gccgctgtct cgtgagtccc gctagtgccg ggcgggagtt gttaagcggc
61 cagggtcagg tgtgctggag cggggtccgg gcccgggttc cagggcgagg cggcggagcg
121 tggcaggcaa gcctagagcg gcgtggtcca tgcgccggcg ccgggggcag agcggagccg
181 cagactcccc tggccccggc gcggccccgg cagccgcggg ctaaggagtc gcgaggttcc
241 cccagctgcc accatgaacc ccgagaagga tttcgcgccg ctcacgccta acatcgtgcg
301 cgccctcaat gacaagctga tcgagccagt gctgacctgc ttcaatgatg cagacagcag
361 gctgcgctac tatgcctgcg aggccctcta caacatcgtc aaggtggccc ggggcgctgt
421 gctgccccac ttcaacgtgc tctttgacgg gctgagcaag ctggcagccg acccagaccc
481 caatgtgaaa agcggatctg agctcctaga ccgcctttta aaggacattg tgactgagag
541 caacaagttt gacctggtga gcttcatccc cttgttgcga gagaggattt actccaacaa
601 ccagtatgcc cggcagttca tcatctcctg gatcctggtt ctggagtcgg tgccagacat
661 taacctgctg gattacctgc cggagatcct ggatggactc ttccagatcc tgggtgacaa
721 tggcaaagag attcgcaaaa tgtgtgaggt tgttcttgga gaattcttaa aagaaattaa
781 gaagaacccc tccagtgtga agtttgctga gatggccaac atcctggtga tccactgcca
841 gacaacagat gacctcatcc agctgacagc catgtgctgg atgcgggagt tcatccagct
901 ggcgggccgc gtcatgctgc cttactcctc cgggatcctg actgctgtct tgccctgctt
961 ggcctacgat gaccgcaaga aaaactcagg catcaaagaa gtggccaacg tgtgcaacca
1021 gagcctgatg aagctggtca cccccgagga cgacgagctg gatgagctga gacctgggca
1081 gaggcaggca gagcccaccc ctgacgatgc cctgccaaag caggagggca cagccagtgg
1141 aggcccagat ggttcctgtg actccagctt cagtagcggc atcagtgtct tcactgcagc
1201 cagcactgaa agagccccag tgacccttca cctcgacggg atcgtgcagg tcctaaactg
1261 ccacctcagt gacacggcca ttgggatgat gaccaggatt gcagttctca agtggctcta
1321 ccacctctac atcaaaactc ctcggaagat gttccggcac acggacagcc tctttcccat
1381 cctactgcag acgttatcgg atgaatcgga tgaggtgatc ctgaaggacc tggaggtgct
1441 ggcagaaatc gcttcctccc ccgcaggcca gacggatgac ccaggccccc tcgatggccc
1501 tgacctccag gccagccact cagagctcca ggtgcccacc cctggcagag ccggcctacc
1561 gaacacctct ggtaccaaag gcttagaatg ttctccttca actcccacca tgaattctta
1621 cttttataag ttcatgatca accttctcaa gagattcagc agcgaacgga agctcctgga
1681 ggtcagaggc cctttcatca tcaggcagct gtgcctcctg ctgaatgcgg agaacatctt
1741 ccactcaatg gcagacatcc tgctgcggga ggaggacccc aagttcgcct cgaccatggt
1801 ccacgccctc aacaccatcc tgctgacctc cacagagctc ttccagctaa ggaaccagct
1861 gaaggacctg aagaccctgg agagccagaa cctgttctgc tgcctgtacc gctcctggtg
1921 ccacaaccca gtcaccacgg tgtccctctg cttcctcacc cagaactacc ggcacgccta
1981 tgacctcatc cagaagtttg gggacctgga ggtcaccgtg gacttcctcg cagaggtgga
2041 caagctggtg cagctgattg agtgccccat cttcacatat ctgcgcctgc agctgctgga
2101 cgtgaagaac aacccctacc tgatcaaggc cctctacggc ctgctcatgc tcctgcctca
2161 gagcagcgcc ttccagctgc tctcgcaccg gctccagtgc gtgcccaacc ctgagctgct
2221 gcagaccgaa gacagtctaa aggcagcccc caagtcccag aaagctgact cccctagcat
2281 cgactacgca gagctgctgc agcactttga gaaggtccag aacaagcacc tggaagtgcg
2341 gcaccagcgg agcgggcgtg gggaccacct ggaccggagg gttgtcctct gacaggcctg
2401 gcacggagga gggcccaccg agtggtccca tgaaacacta agggtcgtca cgccctcccg
2461 aggagctcaa ggacctgcct gtcaggacca gggctgggcc tgccaaccca gggcagtgtt
2521 ggggccgg
//