LOCUS AK297559 1585 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52189 complete cds, highly similar to
Procollagen-lysine,2-oxoglutarate5-dioxygenase 3 precursor (EC
1.14.11.4).
ACCESSION AK297559
VERSION AK297559.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1585)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1585
/clone="FEBRA2012116"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000492183"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 26..1027
/codon_start=1
/note="highly similar to
Procollagen-lysine,2-oxoglutarate5-dioxygenase 3
precursor (EC 1.14.11.4)"
/protein_id="BAG59952.1"
/transl_table=1
/translation="MGHFKDVVTVFLQEILFSFGPCEDAVITKAAPGASPGRRGEKLL
VITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKEME
KYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAESFCWPEWGLAEQYPE
VGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDH
KSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNGPTKVPPVVSTPAPPCP
NPQAPPTLLRSWPFPAPISEVPDPHLHPWRPQPLSLSLSPTAAAQLPGKLRPQWLDS"
BASE COUNT 321 a 480 c 459 g 325 t
ORIGIN
1 gtgtaaatct tgtgggagcc acgaaatggg tcattttaaa gatgtggtca cggtgttctt
61 acaagaaatc ttattttcct ttggtccttg tgaagatgct gtgatcacaa aggcagcccc
121 tggagcttct ccgggcagaa gaggagagaa gctgctggtg atcactgtgg ccacagctga
181 aaccgagggg tacctgcgtt tcctgcgctc tgcggagttc ttcaactaca ctgtgcggac
241 cctgggcctg ggagaggagt ggcgaggggg tgatgtggct cgaacagttg gtggaggaca
301 gaaggtccgg tggttaaaga aggaaatgga gaaatacgct gaccgggagg atatgatcat
361 catgtttgtg gatagctacg acgtgattct ggccggcagc cccacagagc tgctgaagaa
421 gttcgtccag agtggcagcc gcctgctctt ctctgcagag agcttctgct ggcccgagtg
481 ggggctggcg gagcagtacc ctgaggtggg cacggggaag cgcttcctca attctggtgg
541 attcatcggt tttgccacca ccatccacca aatcgtgcgc cagtggaagt acaaggatga
601 tgatgacgac cagctgttct acacacggct ctacctggac ccaggactga gggagaaact
661 cagccttaat ctggatcata agtctcggat ctttcagaac ctcaacgggg ctttagatga
721 agtggtttta aagtttgatc ggaaccgtgt gcgtatccgg aacgtggcct acgacacgct
781 ccccattgtg gtccatggaa acggtcccac taaggtgcca ccagtggtct caacccccgc
841 cccgccctgc cccaaccccc aggcacctcc aacccttctg agaagctggc ccttcccagc
901 ccccatatca gaggtgcctg acccccacct ccacccctgg aggcctcagc cactcagcct
961 cagtctgtcc ccaacagctg cagctcaact acctgggaaa ctacgtcccc aatggctgga
1021 ctcctgaggg aggctgtggc ttctgcaacc aggaccggag gacactcccg ggggggcagc
1081 ctcccccccg ggtgtttctg gccgtgtttg tggaacagcc tactccgttt ctgccccgct
1141 tcctgcagcg gctgctactc ctggactatc cccccgacag ggtcaccctt ttcctgcaca
1201 acaacgaggt cttccatgaa ccccacatcg ctgactcctg gccgcagctc caggaccact
1261 tctcagctgt gaagctcgtg gggccggagg aggctctgag cccaggcgag gccagggaca
1321 tggccatgga cctgtgtcgg caggaccccg agtgtgagtt ctacttcagc ctggacgccg
1381 acgctgtcct caccaacctg cagaccctgc gtatcctcat tgaggagaac aggaaggtga
1441 tcgcccccat gctgtcccgc cacggcaagc tgtggtccaa cttctggggc gccctgagcc
1501 ccgatgagta ctacgcccgc tccgaggact acgtggagct ggtgcagcgg aagcgagtgt
1561 gagtcccgcc agcctgcagc ccccc
//