LOCUS AK297554 1605 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60305 complete cds, highly similar to Rab GDP
dissociation inhibitor beta.
ACCESSION AK297554
VERSION AK297554.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1605)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1605
/clone="FEBRA2011174"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000492178"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 177..1379
/codon_start=1
/note="highly similar to Rab GDP dissociation inhibitor
beta"
/protein_id="BAG59947.1"
/transl_table=1
/translation="MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESA
SITPLEDLYKRFKIPGSPPESMGRGRDWNVDLIPKFLMANGLMGLFEKRRFRKFLVYV
ANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYET
INRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIVQNG
KVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIII
PQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQK
FVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTGSEFDFEEMKRK
KNDIYGED"
BASE COUNT 482 a 343 c 352 g 428 t
ORIGIN
1 agttcttctc ttcccgtctg aggtggcggt cggtctcgcc ttgtcgccag ctccattttc
61 ctctctttct cttccccttt ccttcgcgcc caagagcgcc tcccagcctc gtagggtggt
121 cacggagccc ctgcgccttt tccttgctcg ggtcctgcgt ccgcgcctgc cccgccatga
181 atgaggagta cgacgtgatc gtgctgggca ccggcctgac ggaatgtatc ctgtcaggta
241 taatgtcagt gaatggcaag aaagttcttc atatggatcg aaacccttac tacggaggag
301 agagtgcatc tataacacca ttggaagatt tatacaaaag atttaaaata ccaggatcac
361 cacccgagtc aatggggaga ggaagagact ggaatgttga cttgattccc aagttcctta
421 tggctaatgg cctaatggga ttgtttgaaa aacgtcgctt caggaaattc ctagtgtatg
481 ttgccaactt cgatgaaaaa gatccaagaa cttttgaagg cattgatcct aagaagacca
541 caatgcgaga tgtgtataag aaatttgatt tgggtcaaga cgttatagat tttactggtc
601 atgctcttgc actttacaga actgatgatt acttagatca accgtgttat gaaaccatta
661 atagaattaa actttacagt gaatctttgg caagatatgg caaaagccca tacctttatc
721 cactctatgg ccttggagaa ctgccccaag gatttgcaag gctaagtgcc atttatggag
781 gtacctatat gctgaataaa cccattgaag aaatcattgt acagaatgga aaagtaattg
841 gtgtaaaatc tgaaggagaa attgctcgct gtaagcagct catctgtgac cccagctacg
901 taaaagatcg ggtagaaaaa gtgggccagg tgatcagagt tatttgcatc ctcagccacc
961 ccatcaagaa caccaatgat gccaactcct gccagatcat tattccacag aaccaagtca
1021 atcgaaagtc agatatctac gtctgcatga tctcctttgc gcacaatgta gcagcacaag
1081 ggaagtacat tgctatagtt agtacaactg tggaaaccaa ggagcctgag aaggaaatca
1141 gaccagcttt ggagctcttg gaaccaattg aacagaaatt tgttagcatc agtgacctcc
1201 tggtaccaaa agacttggga acagaaagcc agatctttat ttcccgcaca tatgatgcca
1261 ccactcattt tgagacaacg tgtgatgaca ttaaaaacat ctataagagg atgacaggat
1321 cagagtttga ctttgaggaa atgaagcgca agaagaatga catctatggg gaagactaac
1381 agcagtacat gttattatgt aattaggaca catttaaaat ttggcaaata atgcatataa
1441 tgaaatcaat attgtaaggc ctgcttttgt aatgaaaatg gagagaatga agagcgctgt
1501 gccagtaaat actccccttc acctttctaa ttattaactt gttttcatgg agtggctatt
1561 cagcattggc agttaccaca ttctgttcaa tttaaccaaa ctggc
//