LOCUS AK297543 1999 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56114 complete cds, highly similar to Rap1
GTPase-GDP dissociation stimulator 1.
ACCESSION AK297543
VERSION AK297543.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1999)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1999
/clone="FEBRA2009584"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000492167"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 128..1564
/codon_start=1
/note="highly similar to Rap1 GTPase-GDP dissociation
stimulator 1"
/protein_id="BAH12611.1"
/transl_table=1
/translation="MRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQ
AQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKL
FKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITEL
KTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARND
ANCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTE
AVLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVM
GESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALE
LGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLD
VVSKLRSHENKSVAQQASLTEQRLTVES"
BASE COUNT 635 a 373 c 434 g 557 t
ORIGIN
1 tacggaaaca agtgaaaaaa tccaagcaag tggaatactt cagctgtttg caagtctgtt
61 gactccacag tcttcctgca aagccaaagt agctaacatc atagcagaag tagccaaaaa
121 tgagtttatg cgaattccat gtgtggatgc tggattgatt tcaccactgg tgcagctgct
181 aaatagcaaa gaccaggaag tgctgcttca aacgggcagg gctctaggaa acatatgtta
241 cgatagccat tcgcttcaag ctcagcttat caatatgggt gttattccta ccttagtgaa
301 attactgggc atccactgcc aaaatgcagc tcttacagaa atgtgtcttg ttgcatttgg
361 taatttagca gaacttgagt caagtaaaga acagtttgcc agtacaaaca ttgctgaaga
421 gctagtaaaa ctcttcaaga aacaaataga acatgataag agagaaatga tttttgaagt
481 tcttgctcca ttggcagaaa atgatgctat taaactacag ctggttgaag caggcctagt
541 agagtgtcta ctagagattg ttcagcaaaa agtggatagt gacaaagaag atgatattac
601 tgagctcaaa actggttcag atctcatggt tttattactt cttggagatg aatccatgca
661 gaagttattt gaaggaggaa aaggtagtgt atttcaaagg gtactctctt ggatcccatc
721 aaataaccac cagctacagc ttgctggagc attggcaatt gcaaattttg ccagaaatga
781 tgcaaattgt attcatatgg tagacaatgg gattgtagaa aaacttatgg atttactgga
841 cagacatgta gaagatggaa atgtaacagt acagcatgca gcactaagtg ccctcagaaa
901 cctggccatt ccagttataa ataaagcaaa gatgttatca gctggggtca cagaggcagt
961 tttgaaattt cttaaatctg aaatgcctcc tgttcagttc aaacttctgg gaacattaag
1021 aatgttaata gatgcacaag cagaagctgc tgaacaattg ggaaagaatg ttaagttagt
1081 ggagcgtttg gtggaatggt gtgaagccaa agatcatgct ggtgtgatgg gggagtcaaa
1141 cagactgctg tctgccctta tacgacacag taaatcaaaa gatgtaatta aaaccattgt
1201 gcagagtggt ggcatcaagc atctagttac catggcaact agtgaacatg taataatgca
1261 gaatgaagct cttgttgctt tggcattaat agcagcttta gaattgggca ctgctgagaa
1321 agatctagaa agtgctaaac ttgtacagat tttacataga ctgctagcag atgagagaag
1381 tgctcctgaa atcaaatata attccatggt cctgatatgt gctcttatgg gatctgaatg
1441 tctacacaag gaagtacagg atttggcttt tctagatgtc gtatccaaac ttcgcagtca
1501 tgagaacaaa agtgttgccc agcaggcctc tctcacagag cagagactta ctgtggaaag
1561 ctgagaactg cccgatacac ggcatcatcc catctctaat ttcccctctg tcctccatcc
1621 agcggcttct tccgcttcat tctctaccat accacttgtg catgcatgtg atgttctaat
1681 accaattgaa gaaccgctgt aggtacctcc ctaataagat ttctaaacct atagttagtg
1741 tgatcatgac tttgtcaaag gcaagtctcc acccataacc gttctcttgt attcctgttg
1801 cttgagctac attaagtaga atgtgcatgt tgtagtccta tgatgatgta aacttggtac
1861 tacataatga cttgctccac acatgcagta aactacataa tgatgtactg gtaaactaga
1921 aacaaagaat gcagcaggat ctgtctagct tattaaagat gaaactgaat tggaaaaata
1981 gctccatttt ttggtgctt
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