LOCUS AK297481 1108 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59170 complete cds, highly similar to
Roundabout homolog 1 precursor.
ACCESSION AK297481
VERSION AK297481.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1108)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1108
/clone="FCBBF3028669"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492105"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 157..783
/codon_start=1
/note="highly similar to Roundabout homolog 1 precursor"
/protein_id="BAG59902.1"
/transl_table=1
/translation="MKWKHVPFLVMISLLSLSPNHLFLAQLIPDPEDVERGNDHGTPI
PTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWY
KGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHN
ASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISCVSVP"
BASE COUNT 317 a 279 c 268 g 244 t
ORIGIN
1 aaaatcggaa attgcagcct tgcgatcggg agggattcaa caagttttcc tgcagggatg
61 cgatgtttgt ttcttccttg ccagttgtgc agagtgtccg ttccagataa cacattgtct
121 gtcactggct ggttgtaatg caaggaaggg acaaagatga aatggaaaca tgttcctttt
181 ttggtcatga tatcactcct cagcttatcc ccaaatcacc tgtttctggc ccagcttatt
241 ccagaccctg aagatgtaga gagggggaac gaccacggga cgccaatccc cacctctgat
301 aacgatgaca attcgctggg ctatacaggc tcccgtcttc gtcaggaaga ttttccacct
361 cgcattgttg aacacccttc agacctgatt gtctcaaaag gagaacctgc aactttgaac
421 tgcaaagctg aaggccgccc cacacccact attgaatggt acaaaggggg agagagagtg
481 gagacagaca aagatgaccc tcgctcacac cgaatgttgc tgccgagtgg atctttattt
541 ttcttacgta tagtacatgg acggaaaagt agacctgatg aaggagtcta tgtctgtgta
601 gcaaggaatt accttggaga ggctgtgagc cacaatgcat cgctggaagt agccatactt
661 cgggatgact tcagacaaaa cccttcggat gtcatggttg cagtaggaga gcctgcagta
721 atggaatgcc aacctccacg aggccatcct gagcccacca tttcatgcgt ctcagtgccc
781 taggcccaca agtcccgtgt ctacagacag caacatgagt gccgccgtaa tgcagaaaac
841 cagaccagcc aagaaactga aacaccagcc aggacatctg cgcagagaaa cctacacaga
901 tgatcttcca ccacctcctg tgccgccacc tgctataaag tcacctactg cccaatccaa
961 gacacagctg gaagtacgac ctgtagtggt gccaaaactc ccttctatgg atgcaagaac
1021 agacagatca tcagacagaa aaggaagcag ttacaagggg agagaagtgt tggatggaag
1081 acaggttgtt gacatgcgaa caaatcca
//