LOCUS AK297472 3078 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61318 complete cds, weakly similar to Zinc
finger protein Kr18.
ACCESSION AK297472
VERSION AK297472.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3078)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3078
/clone="FCBBF3027676"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492096"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 513..2750
/codon_start=1
/note="weakly similar to Zinc finger protein Kr18"
/protein_id="BAG59893.1"
/transl_table=1
/translation="MRSNYETLVSLDDGLPKPELISWIEHGGEPFRKWRESQKSGNII
CSSVDMHFDPGFEEQLFWGSQQAMNSGKTKSHFQLDPESQCSFGSFVSFRPDQGITLG
SPQRHDARAPPPLACGPSESTLKEGIPGPRNLDLPGLWDVPAWESTQHPWPVCGESCW
ENNHLVMHQRGHSKDRTRRAWEKFNKRAETQMPWSSPRVQRHFRCGVCGKSFRRKLCL
LRHLAAHTGRGPFRNADGEMCFRHELTHPSHRLPQQGEKPAQCTPCGKRSLPVDSTQA
RRCQHSREGPASWREGRGASSSVHSGQKPGSRLPQEGNSHQEGDTEALQHGAEGPCSC
SECGERSPMSARLASPCRAHTGEKPFQCAHCTKRFRLRRLLQVHQHAHGGERPFSCRK
CGKGFAKQCKLTEHIRVHSGEKPFRCAKCGRNFRQRGQLLRHQRLHTDEKPFQCPECG
LSFRLESMLRAHRLRHGGERPFSCSECGRGFTHQCKLREHLRVHSGERPFQCLKCDKR
FRLKGILKAHQHTHSKERPFSCGECGKGFTRQSKLTEHLRVHSGERPFQCPECNRSFR
LKGQLLSHQRLHTGERPFQCPECDKRYRVKADMKAHQLLHSGEMPFSCECGKGFVKHS
KLIEHIRTHTGEKPFQCPKCDKSFRLKAQLLSHQGLHTGERPFHCPECDKNFRERGHM
LRHQRIHRPERPFACGDCGKGFIYKSKLAEHIRVHTKSCPAPNELDIKKRLSQLFAMI
EADWS"
BASE COUNT 767 a 811 c 921 g 579 t
ORIGIN
1 agtgcgcagc agggcaggtt cctgcggagc cgccggagac ggtcgggttt gccagggccg
61 ggcgggaccg cggggaccat ggcggagccg cctcgggact attcacaata gcaaagatgt
121 ggaatcaacc taaatgccca tcaatggcag actggataaa gaaaatgtac atatgcacta
181 tggagtacta tgcagccata aagaaaatca tatcctttgc agaaagatgg atggagctgg
241 aggccattgt cttaagtgag ataacacagg agtagaaaac aaagtgccgt tctcacttat
301 aagggcgagc taaacactga gtatatatgg atacgaagca gggaatgaat aacagacatt
361 ggggcctact tgaaggtgga ggctgggagg agaatgagga ctgaaaaatt ccttatcggc
421 tacctctgac ttttgaggat gttgctattt atttctccga gcaagaatgg caggatctag
481 aggcatggca gaaggaactt tacaagcatg tgatgagaag caattatgag actctcgtct
541 ctctagatga tggacttcca aaaccagaac taatatcctg gattgaacac gggggagagc
601 ccttcaggaa atggagagaa tcacagaaat caggaaacat aatttgctcc tctgttgata
661 tgcattttga tccaggtttt gaggaacagc tgttttgggg aagccagcag gctatgaatt
721 caggaaaaac taaaagccat ttccaattag atcctgaaag ccagtgttcc tttggatcct
781 ttgtttcctt caggcctgac caaggcatca ccctcgggag cccacagaga cacgacgcca
841 gggctcctcc accactagcc tgcggcccca gtgaatctac cctaaaagaa ggaatcccag
901 gtcccagaaa tctggatctt cctggtttgt gggacgtccc cgcctgggag agcacccagc
961 acccttggcc tgtctgcggg gaaagctgtt gggagaacaa ccatttagta atgcaccaga
1021 gaggccactc aaaggaccgg acacgtaggg cctgggagaa attcaacaag agggcggaga
1081 cgcagatgcc gtggagcagc cctcgggtac agaggcactt ccggtgtggc gtgtgcggta
1141 agagcttccg ccggaagctg tgtctgctgc gccatctggc ggcccacacg gggaggggcc
1201 ccttccggaa cgctgacggt gaaatgtgct tccgacacga gctgacccat cccagccacc
1261 gcctcccgca gcagggggag aagcctgccc agtgcacccc atgcggcaag cgctccctcc
1321 cagtggacag cacgcaggct cgccggtgcc agcacagccg ggaggggccg gcctcttgga
1381 gagaaggccg cggggcctcc agcagtgtgc actcgggaca gaaaccaggc tcgcgcctgc
1441 cccaggaggg gaacagccac caggaagggg acacggaggc gctgcagcat ggcgcagagg
1501 ggccctgctc ctgctcggag tgtggcgagc gctcccctat gagcgccagg ctcgccagcc
1561 cctgcagggc gcatactgga gaaaagccct tccagtgtgc gcattgcacc aagcgcttcc
1621 gcctgcgccg cctgctgcag gtccaccagc acgcgcacgg tggggagaga ccgttctcct
1681 gcaggaagtg tggcaagggc ttcgccaagc agtgtaaact cacggagcac attcgagtcc
1741 acagcggaga gaagcctttc cggtgtgcca agtgtggcag gaacttccgt cagaggggac
1801 agctgctgcg gcaccagcgg ctgcacacgg acgagaagcc ctttcagtgc ccagagtgtg
1861 ggctgagctt ccgcctggag agcatgctga gagcccaccg gctccggcac ggtggggaga
1921 ggccgttctc ctgtagcgag tgtggcagag gcttcaccca ccagtgcaag ctccgtgagc
1981 acctgagagt gcacagcggg gagaggccct tccagtgcct gaagtgcgac aagcgcttcc
2041 gcctgaaggg catcctgaag gcccaccagc acacgcacag caaggagagg ccgttctcgt
2101 gcggggagtg tggcaagggc ttcaccagac aatccaagct cacggagcac ttgcgcgtgc
2161 acagcgggga gagacccttc cagtgcccag agtgcaacag gagcttccgc ctgaaggggc
2221 agctgctcag ccatcagcgc ctgcacacgg gagagaggcc cttccagtgt ccggagtgcg
2281 acaagcgcta tcgcgtgaag gccgacatga aggcccacca gctgctgcac agcggggaga
2341 tgcctttctc ctgtgagtgc ggcaagggct ttgtgaaaca ctcaaagctc atcgagcaca
2401 tcagaacgca cacgggagag aagccttttc agtgtcccaa gtgtgacaag agtttccgcc
2461 tgaaggcgca gctgctcagc catcagggcc tgcacacagg ggagaggcct tttcactgcc
2521 ctgagtgtga caagaacttc cgggaaaggg gacacatgct gaggcaccag cgcatccaca
2581 ggcccgagag gccctttgcc tgtggcgatt gtgggaaggg cttcatttac aagtctaagc
2641 ttgcggagca catcagagta cacacaaaat cctgtcctgc tccaaatgaa ctggacatta
2701 agaaaaggct cagccaactg tttgcaatga tagaggccga ttggagttga ggcagagtgg
2761 gacatccaaa gcgttgagca ggattggtat tgcccaggaa tccacagcaa cagtagccag
2821 acccgctggt agacgggttt taggagcagg tatccttctt tgagcaagag tgtcatgcaa
2881 gttaggaata tgaagaacca caaaggattt tctcttcaga agcatcacca attatatttc
2941 tttctttttt tttttttttt ccaagatgga gttttgctct gtcacccagg ctggagtgca
3001 gtggcgtgat cccagctata ttggaaaaga cagcattata aaacaaggac ataattttat
3061 gaaaaaggag gcatctgc
//