LOCUS AK297407 3090 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55581 partial cds, highly similar to AF4/FMR2
family member 3.
ACCESSION AK297407
VERSION AK297407.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3090)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3090
/clone="FCBBF3022318"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492031"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 26..>3090
/codon_start=1
/note="highly similar to AF4/FMR2 family member 3"
/protein_id="BAH12572.1"
/transl_table=1
/translation="MTLRLDAGGIPSLAPRVYISGSPSQRFLPRKRNKGESAGRDSLL
AGSARFGSRGEAQLQGSELLSRNSGESLVRIRSCGQELITCLSRPETGGKFEVDTQRP
VCPPSRARAARASAAAVAAAATLTPPTMDSFDLALLQEWDLESLWGEDILNQRNDSLV
VEFQSSASRCRSVYEPDRNALRRKERERRNQETQQDDGTFNSSYSLFSEPYKTNKGDE
LSNRIQNTLGNYDEMKDFLTDRSNQSHLVGVPKPGVPQTPVNKIDEHFVADSRAQNQP
SSICSTTTSTPAAVPVQQSKRGTMGWQKAGHPPSDGQQRATQQGSLRTLLGDGVGRQQ
PRAKQVCNVEVGLQTQERPPAMAAKHSSSGHRVQNFPPSLASKPSLVQQKPTAYVRPM
DGQDQAPDESPKLKSSSETSVHCTSYRGVPASKPEPARAKAKLSKFSIPKQGEESRSG
ETNSCVEEIIREMTWLPPLSAIQAPGKVEPTKFPFPNKDSQLVSSGHNNPKKGDAEPE
SPDNGTSNTSMLEDDLKLSSDEEENEQAAQRTALRALSDSAVVQQPNCRTSVPSSKGS
SSSSSSGSSSSSSDSESSSGSDSETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKW
LNKVNPHKPPILIQNESHGSESNQYYNPVKEDVQDCGKVPDVCQPSLREKEIKSTCKE
EQRPRTANKAPGSKGVKQKSPPAAVAVAVSAAAPPPAVPCAPAENAPAPARRSAGKKP
TRRTERTSAGDGANCHRPEEPAAADALGTSVVVPPEPTKTRPCGNNRASHRKELRSSV
TCEKRRTRGLSRIVPKSKEFIEAESSSSSSSSDSDLESEQEEYPLSKAQTVAASASSG
NDQRLKEAAANGGSGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPLKDSD
EIRSLWVKIDLTLLSRIPEHLPQEPGVLSAPATKDSESAPPSHTSDTPAEKALPKSKR
KRKCDNEDDYREIKKSQGEKDSSSRLATSTSNTLSANHCNMNINSVAIP"
BASE COUNT 801 a 905 c 872 g 512 t
ORIGIN
1 attcggaggt gggtgaggtg agaggatgac tcttcggctt gacgctggag ggatcccgtc
61 acttgcaccc agggtttaca tttctggcag ccccagtcag cggttcttgc ccagaaaaag
121 gaacaaaggg gagagtgctg gaagggactc ccttttggcg gggagtgcga ggtttggttc
181 gcgtggtgag gcacaactgc agggctctga gctgctctct aggaattctg gggaatccct
241 ggtgagaatc cggagctgtg gccaagagct gatcacctgc ctttccagac cggagacggg
301 cggcaagttt gaagtcgaca cccagaggcc agtttgtccc ccttcccgcg cgcgggcggc
361 ccgagcctcg gcggcggcgg tagcggcggc ggcgacgctg acacctccca ccatggacag
421 cttcgactta gccctgctcc aggaatggga cctcgagtca ctgtggggtg aagacatctt
481 aaaccagagg aatgactctc tagttgtgga atttcagtca tcagccagca gatgcaggag
541 tgtctatgaa ccagatagaa atgcattacg gaggaaagaa cgagaaagaa gaaatcaaga
601 aactcaacag gatgatggca cgtttaattc tagttactct ctcttcagtg agccctacaa
661 gactaacaag ggggatgaac tctccaaccg gatccagaac actttaggca attatgatga
721 aatgaaagac tttttaactg atagatccaa tcagagtcat ctcgttggag ttcccaaacc
781 tggggttcct cagactcctg tgaacaagat cgatgaacat tttgttgcag attcaagagc
841 ccagaaccag ccctcgtcta tctgtagcac tacaacttcc acaccagcag ctgtccccgt
901 gcagcagagt aagagaggca ctatgggctg gcagaaggct gggcacccac cctctgacgg
961 ccaacagaga gcaacacaac agggctctct caggaccttg cttggagatg gtgttggcag
1021 acagcagcct cgggccaaac aagtgtgcaa tgtggaggtg ggccttcaga cccaggagag
1081 gccacctgcc atggcggcca agcacagcag cagcggacac cgtgttcaga actttcctcc
1141 atccctagct tcaaaaccca gcctggtcca gcagaaaccg accgcgtatg tgaggccaat
1201 ggacggccaa gatcaggccc ctgatgagtc tcctaagctg aagtcgtctt cggaaaccag
1261 cgtgcactgc acatcataca ggggagtccc tgccagcaag ccggagcctg ccagagccaa
1321 ggccaagctc tccaagttca gcatccccaa gcagggggag gagagtagat ctggagaaac
1381 caacagctgt gttgaagaaa taatccggga gatgacctgg cttccaccac tttctgctat
1441 tcaagcacct ggcaaagtgg aaccaaccaa atttccattt ccaaataagg actctcagct
1501 tgtatcctct ggacacaata atccaaagaa aggtgatgca gagccagaga gtccagacaa
1561 tggcacatcg aatacatcaa tgctggaaga tgaccttaag ctaagcagtg atgaagagga
1621 gaatgaacag gcagctcaga gaacggctct ccgcgctctc tctgacagcg ctgtggtcca
1681 gcagcccaac tgcagaacct cggtgccttc cagcaagggc agcagcagca gcagcagcag
1741 cggcagcagc agctcctcca gcgactcaga gagcagctcc ggatctgact cggagaccga
1801 gagcagctcc agcgagagtg agggcagcaa gcccccccac ttctccagcc ccgaggctga
1861 accggcatcc tctaacaagt ggcagctgga taaatggcta aacaaagtta atccccacaa
1921 gcctcctatt ctgatccaaa atgaaagcca cgggtcagag agcaatcagt actacaaccc
1981 ggtgaaagag gacgtccagg actgtgggaa agtccccgac gtttgccagc ccagcctgag
2041 agagaaggag atcaagagca cttgcaagga ggagcaaagg ccaaggacag ccaacaaggc
2101 ccctgggagt aaaggcgtga agcagaagtc cccgcccgcg gccgtggccg tggcggtgag
2161 cgcagccgcc ccgccacccg cagtgccctg tgcgcccgcg gagaacgcgc ccgcgcctgc
2221 ccggaggtcc gcgggcaaga agcccaccag gcgcaccgag aggacctcag ccggggacgg
2281 cgccaactgc caccggcccg aggagcccgc ggccgcggac gcgctgggga cgagcgtggt
2341 ggtccccccg gagcccacca aaaccaggcc ctgtggcaac aacagagcga gccaccgcaa
2401 ggagctgcgc tcctccgtga cctgcgagaa gcgccgcacg cgggggctaa gcaggatcgt
2461 ccccaaatcc aaggagttca ttgaggcaga gtcgtcatct tcatcctcct cctcggactc
2521 cgacctggag tccgagcagg aggagtaccc tctgtccaaa gcacagaccg tggctgcctc
2581 tgcctcctcc gggaatgatc agaggctgaa ggaggccgct gccaacgggg gcagtggtcc
2641 tagggcccct gtaggctcca tcaacgccag gaccaccagt gacatcgcca aggagctgga
2701 ggagcagttc tacacactgg tcccctttgg ccggaacgaa cttctctccc ctctaaagga
2761 cagtgatgag atcaggtctc tctgggtcaa aatcgacctg accctcctgt ccaggatccc
2821 agaacacctg ccccaggagc caggggtatt gagcgcccct gccaccaagg actctgagag
2881 cgcaccgccc agccacacct cggacacacc tgcagaaaag gctttgccaa aatccaagag
2941 gaaacgcaag tgtgacaacg aagacgacta cagggagatc aagaagtccc agggagagaa
3001 agacagctct tcaagactgg ccacctccac cagtaatact ttgtctgcaa accactgcaa
3061 catgaacatc aacagtgtgg caataccaat
//