LOCUS AK297404 2359 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61317 complete cds, highly similar to Histone
deacetylase 9.
ACCESSION AK297404
VERSION AK297404.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2359)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2359
/clone="FCBBF3022112"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492028"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 141..1781
/codon_start=1
/note="highly similar to Histone deacetylase 9"
/protein_id="BAH12570.1"
/transl_table=1
/translation="MHSMISSVDVKSEVPAGLEPISPLDLRTDLRMMMPVVDPVVREK
QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEK
EQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDT
PTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKT
ESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLS
LYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSH
PHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRG
THKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQ
LKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPV
DSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII"
BASE COUNT 714 a 546 c 529 g 570 t
ORIGIN
1 ggcacagaca cagataggag aagggcaccg gctggagcca cttgcaggac tgagggtttt
61 tgcaacaaaa ccctagcagc ctgaagaact ctaagccaga tggggtggct ggacgagagc
121 agctcttggc tcagcaaaga atgcacagta tgatcagctc agtggatgtg aagtcagaag
181 ttcctgcggg cctggagccc atctcacctt tagacctaag gacagacctc aggatgatga
241 tgcccgtggt ggaccctgtt gtccgtgaga agcaattgca gcaggaatta cttcttatcc
301 agcagcagca acaaatccag aagcagcttc tgatagcaga gtttcagaaa cagcatgaga
361 acttgacacg gcagcaccag gctcagcttc aggagcatat caaggaactt ctagccataa
421 aacagcaaca agaactccta gaaaaggagc agaaactgga gcagcagagg caagaacagg
481 aagtagagag gcatcgcaga gaacagcagc ttcctcctct cagaggcaaa gatagaggac
541 gagaaagggc agtggcaagt acagaagtaa agcagaagct tcaagagttc ctactgagta
601 aatcagcaac gaaagacact ccaactaatg gaaaaaatca ttccgtgagc cgccatccca
661 agctctggta cacggctgcc caccacacat cattggatca aagctctcca ccccttagtg
721 gaacatctcc atcctacaag tacacattac caggagcaca agatgcaaag gatgatttcc
781 cccttcgaaa aactgaatcc tcagtcagta gcagttctcc aggctctggt cccagttcac
841 caaacaatgg gccaactgga agtgttactg aaaatgagac ttcggttttg ccccctaccc
901 ctcatgccga gcaaatggtt tcacagcaac gcattctaat tcatgaagat tccatgaacc
961 tgctaagtct ttatacctct ccttctttgc ccaacattac cttggggctt cccgcagtgc
1021 catcccagct caatgcttcg aattcactca aagaaaagca gaagtgtgag acgcagacgc
1081 ttaggcaagg tgttcctctg cctgggcagt atggaggcag catcccggca tcttccagcc
1141 accctcatgt tactttagag ggaaagccac ccaacagcag ccaccaggct ctcctgcagc
1201 atttattatt gaaagaacaa atgcgacagc aaaagcttct tgtagctggt ggagttccct
1261 tacatcctca gtctcccttg gcaacaaaag agagaatttc acctggcatt agaggtaccc
1321 acaaattgcc ccgtcacaga cccctgaacc gaacccagtc tgcacctttg cctcagagca
1381 cgttggctca gctggtcatt caacagcaac accagcaatt cttggagaag cagaagcaat
1441 accagcagca gatccacatg aacaaactgc tttcgaaatc tattgaacaa ctgaagcaac
1501 caggcagtca ccttgaggaa gcagaggaag agcttcaggg ggaccaggcg atgcaggaag
1561 acagagcgcc ctctagtggc aacagcacta ggagcgacag cagtgcttgt gtggatgaca
1621 cactgggaca agttggggct gtgaaggtca aggaggaacc agtggacagt gatgaagatg
1681 ctcagatcca ggaaatggaa tctggggagc aggctgcttt tatgcaacag gtaataggca
1741 aagatttagc tccaggattt gtaattaaag tcattatctg aacatgaaat gcattgcagg
1801 tttggtaaat ggatatgatt tcctatcagt ttatatttct ctatgatttg agttcagtgt
1861 ttaaggattc tacctaatgc agatatatgt atatatctat atagaggtct ttctatatac
1921 tgatctctat atagatatca atgtttcatt gaaaatccac tggtaaggaa atacctgtta
1981 tactaaaatt atgatacata atatctgagc agttaatagg ctttaaattt atcccaaagc
2041 ctgctacacc aattacttct aaagaaaaca aattcactgt tattttgagt ttatgtgttg
2101 agatcagtga ctgctggata gtctcccagt ctgatcaatg aagcattcga ttagtttttg
2161 attttttgca acatctagaa tttaattttc acatcactgt acataatgta tcatactata
2221 gtcttgaaca ctgttaaagg tagtctgccc cttccttcct ctctcttttt ttagttaagt
2281 agaaatgttc tggtcaccat gccagtagtc ctaggttatt gtgtaggttg caattgaaca
2341 tattaggaat acaggtggt
//