LOCUS AK297402 1300 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50990 complete cds, highly similar to Gap
junction alpha-1 protein.
ACCESSION AK297402
VERSION AK297402.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1300)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1300
/clone="FCBBF3021662"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492026"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 262..1113
/codon_start=1
/note="highly similar to Gap junction alpha-1 protein"
/protein_id="BAG59841.1"
/transl_table=1
/translation="MRKEEKLNKKEEELKVAQTDGVNVDMHLKQIEIKKFKYGIEEHG
KVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLS
RPTEKTIFIIFMLVVSLVSLALNIIELFYVFFKGVKDRVKGKSDPYHATSGALSPAKD
CGSQKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQ
NRMGQAGSTISNSHAQPFDFPDDNQNSKKLAAGHELQPLAIVDQRPSSRASSRASSRP
RPDDLEI"
BASE COUNT 354 a 293 c 318 g 335 t
ORIGIN
1 aaagctttta cgaggtatca gcacttttct ttcattaggg ggaaggcgtg aggaaagtac
61 caaacagcag cggagtttta aactttaaat agacaggtct gagtgcctga acttgccttt
121 cgttgtaaca ctcagcaacc tggttgtgaa aatgtctgct atgacaagtc tttcccaatc
181 tctcatgtgc gcttctgggt cctgcagatc atatttgtgt ctgtacccac actcttgtac
241 ctggctcatg tgttctatgt gatgcgaaag gaagagaaac tgaacaagaa agaggaagaa
301 ctcaaggttg cccaaactga tggtgtcaat gtggacatgc acttgaagca gattgagata
361 aagaagttca agtacggtat tgaagagcat ggtaaggtga aaatgcgagg ggggttgctg
421 cgaacctaca tcatcagtat cctcttcaag tctatctttg aggtggcctt cttgctgatc
481 cagtggtaca tctatggatt cagcttgagt gctgtttaca cttgcaaaag agatccctgc
541 ccacatcagg tggactgttt cctctctcgc cccacggaga aaaccatctt catcatcttc
601 atgctggtgg tgtccttggt gtccctggcc ttgaatatca ttgaactctt ctatgttttc
661 ttcaagggcg ttaaggatcg ggttaaggga aagagcgacc cttaccatgc gaccagtggt
721 gcgctgagcc ctgccaaaga ctgtgggtct caaaaatatg cttatttcaa tggctgctcc
781 tcaccaaccg ctcccctctc gcctatgtct cctcctgggt acaagctggt tactggcgac
841 agaaacaatt cttcttgccg caattacaac aagcaagcaa gtgagcaaaa ctgggctaat
901 tacagtgcag aacaaaatcg aatggggcag gcgggaagca ccatctctaa ctcccatgca
961 cagccttttg atttccccga tgataaccag aattctaaaa aactagctgc tggacatgaa
1021 ttacagccac tagccattgt ggaccagcga ccttcaagca gagccagcag tcgtgccagc
1081 agcagacctc ggcctgatga cctggagatc tagatacagg cttgaaagca tcaagattcc
1141 actcaattgt ggagaagaaa aaaggtgctg tagaaagtgc accaggtgtt aattttgatc
1201 cggtggaggt ggtactcaac agccttattc atgaggctta gaaaacacaa agacattaga
1261 atacctaggt tcactggggg tgtatggggt agatgggtgg
//