LOCUS AK297401 3840 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53424 complete cds, highly similar to Mus
musculus cytoplasmic FMR1 interacting protein 2 (Cyfip2), mRNA.
ACCESSION AK297401
VERSION AK297401.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3840)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3840
/clone="FCBBF3021618"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492025"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 97..3633
/codon_start=1
/note="highly similar to Mus musculus cytoplasmic FMR1
interacting protein 2 (Cyfip2), mRNA"
/protein_id="BAH12569.1"
/transl_table=1
/translation="MTTHVTLEDALSNVDLLEELPLPNEQPNRVEIYEKTVEVLEPEV
TKLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNM
KCSVKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYE
ELLADIVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLS
KIDKFFKQLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQ
IRDDHIRFISELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVME
VYSWKLVHPTDKFCNEDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRM
ESVFNQAIRNTIYAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGRE
PPNDPCLRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSL
DGPIVLAIEDFHKQSFFFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEM
SMPWILTDHILETKEPSMMEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFD
QFVYKLADQIFAYYKAMAGSVLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLL
GRSIDLNRLITQRISAAMYKSLDQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHM
TLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYCCNGSTNRFVRTAIPFTQE
PQRDKPTNVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEE
LLKIVKSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELK
TDVFQSLREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMK
RLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSYLQD
PIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSI
IVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLKKMADRIRKYQILNNEVFAIL
NKYMKSVETDSSTVEHVRCFRPPIHQSLATTC"
BASE COUNT 947 a 1070 c 999 g 824 t
ORIGIN
1 agagcatcct gcgccccggc gcggggccct gcggtagcct caggcccctc ccctggaccc
61 gccgcagagc cagtgcagaa tacagaaact gcagccatga ccacgcacgt caccctggaa
121 gatgccctgt ccaacgtgga cctgcttgaa gagcttcccc tccccaacga gcagcccaac
181 cgagtagaga tctatgagaa gacagtagag gtgctggagc cggaggtcac caagctcatg
241 aagttcatgt attttcagcg caaggccatc gagcggttct gcagcgaggt gaagcggctg
301 tgccatgccg agcgcaggaa ggactttgtc tctgaggcct acctcctgac ccttggcaag
361 ttcatcaaca tgtttgctgt cctggatgag ctaaagaaca tgaagtgcag cgtcaagaat
421 gaccactctg cctacaagag ggcagcacag ttcctgcgga agatggcaga tccccagtct
481 atccaggagt cgcagaacct ttccatgttc ctggccaacc acaacaggat cacccagtgt
541 ctccaccagc aacttgaagt gatcccaggc tatgaggagc tgctggctga cattgtcaac
601 atctgtgtgg attactacga gaacaagatg tacctgactc ccagtgagaa acatatgctc
661 ctcaaggtga tgggctttgg cctctaccta atggatggaa atgtcagtaa catttacaaa
721 ctggatgcca agaagagaat taatcttagc aaaattgata aattctttaa gcagctgcag
781 gtggtgcccc ttttcggcga catgcagata gagctggcca gatacattaa gaccagtgct
841 cactatgaag agaacaagtc caagtggacg tgcacccaga gcagcatcag cccccagtac
901 aatatctgcg agcagatggt tcagatccgg gatgaccaca tccgcttcat ctccgagctc
961 gctcgctaca gcaacagtga ggtggtgacg ggctcagggc tggacagcca gaagtcagac
1021 gaggagtatc gcgagctctt cgacctagcc ctgcggggtc tgcagcttct atccaagtgg
1081 agcgcccacg tcatggaggt gtactcttgg aagctggttc atcccacaga caagttctgc
1141 aacgaggact gtcctggcac cgcggaggaa tatgagagag ccacacgcta caattacacc
1201 agtgaggaaa aatttgcctt cgttgaggtg atcgccatga tcaaaggcct gcaggtgctc
1261 atgggcagga tggagagcgt cttcaaccag gccatcagga acaccatcta cgcggcattg
1321 caggacttcg cccaggtgac gctgcgtgag cccctgcggc aggcggtacg gaagaagaag
1381 aatgtcctca tcagcgtcct gcaggcaatt cgaaagacca tctgtgactg ggagggaggg
1441 cgagagcccc ctaatgaccc atgcttgaga ggggagaagg accccaaagg tggatttgat
1501 atcaaggtgc cccggcgtgc tgtggggcca tccagcacac agctgtacat ggtgcggacc
1561 atgcttgaat cactcattgc agacaaaagc ggctccaaga agaccctgag gagcagcctg
1621 gatggaccca ttgtcctcgc catagaggac tttcacaaac agtccttctt cttcacacat
1681 ctgctcaaca tcagtgaagc cctgcagcag tgttgtgacc tctcccagct ctggttccga
1741 gaattcttcc tggagttaac catgggccga cgaatccagt tccccatcga gatgtccatg
1801 ccctggattc taacggacca tatcctggaa accaaagaac cttccatgat ggagtatgtc
1861 ctctaccctc tggatctgta caacgacagc gcccactatg ctctgaccaa gtttaaaaag
1921 cagttcctgt acgatgagat agaagctgag gtgaacctgt gttttgatca gtttgtctac
1981 aagctggcag accagatctt tgcttactac aaagccatgg ctggcagtgt cctgttggat
2041 aaacgttttc gagctgagtg taagaattat ggcgtcatca ttccgtatcc accgtccaat
2101 cgctatgaaa cactgctgaa gcagagacac gtccagctgt tgggtagatc aattgacttg
2161 aacagactca ttacccagcg catctctgcc gccatgtata aatccttgga ccaagctatc
2221 agccgctttg agagtgagga cctgacctcc attgtggagc tggagtggct gctggagatt
2281 aaccggctca cgcatcggct gctctgtaag catatgacgc tggacagctt cgatgccatg
2341 ttccgagagg ccaatcacaa tgtgtccgcc ccctatggcc gtatcaccct gcatgtcttc
2401 tgggaactga actttgactt tctccccaac tactgctgca atgggtccac taaccgtttt
2461 gtgcggactg ccattccttt cacccaagaa ccacaacgag acaaacctac caacgtccag
2521 ccttattacc tctatggatc caagcctctc aacattgcct acagccacat ctacagctcc
2581 tacaggaatt tcgtggggcc acctcatttc aagactatct gcagactcct gggttatcag
2641 ggcatcgctg tggtcatgga ggaactgcta aagattgtga agagcttgct ccaaggaacc
2701 attctccagt atgtgaaaac actgatagag gtgatgccca agatatgccg cttgccccga
2761 catgagtatg gctccccagg gatcctggag ttcttccacc accagctgaa ggacatcatt
2821 gagtacgcag agctcaaaac agacgtgttc cagagcctga gggaagtggg caatgccatc
2881 ctcttctgcc tcctcataga gcaagctctg tctcaggagg aggtctgcga tttgctccat
2941 gccgcaccct tccaaaacat cttgcctaga gtctacatca aagaggggga gcgcctggag
3001 gtccggatga aacgtctgga agccaagtat gccccgctcc acctggtccc tctgatcgag
3061 cggctgggga cccctcagca aatcgccatt gctcgcgagg gtgacctcct gaccaaggag
3121 cggctgtgct gtggcctgtc catgttcgag gtcatcctga cccgcattcg gagctacctg
3181 caggacccca tctggcgggg cccaccgccc accaatggcg tcatgcacgt cgatgagtgt
3241 gtggagttcc accggctgtg gagcgccatg cagttcgtgt actgcatccc tgtgggaacc
3301 aacgagttca cagctgagca gtgtttcggc gatggcttga actgggctgg ttgctccatc
3361 attgtcctgc tgggccagca gcgtcgcttt gacctgttcg acttctgtta ccacctgcta
3421 aaagtgcaga ggcaggacgg gaaggatgaa atcattaaga atgtgcccct gaagaagatg
3481 gccgaccgga tcaggaagta tcagatcttg aacaatgagg tttttgccat cctgaacaaa
3541 tacatgaagt ccgtggagac agacagttcc actgtggagc atgtgcgctg cttccggcca
3601 cccatccacc agtccttggc caccacttgc taagcagaag atcctgcaga cccttatctg
3661 gaggaggaag agaagcagga gagagaaagc cacagccagc ctgccatagg atccaactgg
3721 acaacgtgtg ggatggacct ggaaacaagc acctccccaa acacatcacc actccctagg
3781 gcggggcctg tgcatgctct cccatgacat ctccatgctg gtttctccat agcataaatg
//