LOCUS AK297396 2432 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55724 complete cds, highly similar to Nuclear
valosin-containing protein-like.
ACCESSION AK297396
VERSION AK297396.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2432)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2432
/clone="FCBBF3020179"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492020"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 257..2260
/codon_start=1
/note="highly similar to Nuclear valosin-containing
protein-like"
/protein_id="BAG59836.1"
/transl_table=1
/translation="MKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS
NVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAI
AGAECSGMITAHCSFDFSGSNDPPASASQELDLPILKVAAPEIVSGVSGESEQKLREL
FEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVI
GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHL
TPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSE
TQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWA
DIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANES
GLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGA
SVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL
AILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQK
SGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR"
BASE COUNT 727 a 518 c 617 g 570 t
ORIGIN
1 aaagaccgac gcgatgaagc ccagacctgc agggttcgtg gataataaac tcaagcagcg
61 agtcatccag tatagactat ggtcgaagaa aaagaaatgc ttttaggatt caggtagaaa
121 aagtatttag cataattagt agtgagaagg aacttaagaa tttaacagaa ttagaagatg
181 aacatttggc aaaaagggca agacaaggtg aagaggataa tgagattcaa aagattcttc
241 tcttttggag agtgatatga aacggaaagg caagctaaag aataaaggaa gcaaaaggaa
301 gaaagaagat cttcaggaag tagatggaga aattgaagct gtcctacaaa agaaagctaa
361 agccaggggg ttagaattcc agatctccaa cgtgaagttt gaagatgtgg gaggcaatga
421 tatgacatta aaagaggtct gcaagatgct catacacatg cgtcacccgg aggtgtacca
481 ccacctgggc gtcgtgcccc ctcgtggagt tctccttcat ggaccaccag gctgtgggaa
541 gacattactt gcacatgcaa ttgctggggc tgagtgcagt ggcatgatca cagctcactg
601 cagctttgac ttctcaggct caaatgatcc tcctgcctca gcctcacagg aacttgacct
661 gccaattttg aaagtggctg ctccagagat tgtgtctgga gtatccggag agtctgagca
721 gaagctgaga gaactatttg agcaagctgt gtcaaatgca ccatgtatca ttttcattga
781 tgaaattgat gctattaccc ccaaaagaga agtggcttca aaagatatgg aacgaagaat
841 tgtagcccaa ctcctaacct gcatggatga tctgaataat gtggctgcta cagcccgggt
901 cctagttatt ggagctacta atcgaccaga ctcgttagac cctgctttga gacgtgcggg
961 aaggttcgac cgagaaatat gcctaggtat cccagatgaa gcatccaggg aaagaatact
1021 tcaaacattg tgcagaaaac tgaggcttcc tcaagctttt gatttctgtc acttagcaca
1081 cctaactcca ggctttgttg gtgctgatct catggcactg tgccgagagg cagcaatgtg
1141 tgcagtcaat agagtcttaa tgaagctaca ggaacagcag aagaaaaatc ctgaaatgga
1201 agatttgcca tctaaaggag tccaggagga aaggctggga actgagccca cttctgaaac
1261 acaggatgaa ttacaaaggc tgctggggtt gctaagagac caagatcccc tctcagagga
1321 gcagatgcaa ggactgtgca ttgaactgaa tgatttcatt gttgctctat cctcagtcca
1381 accctctgcc aaaagggaag gctttgtcac tgtccctaat gtgacatggg cagatattgg
1441 tgccctggaa gacattagag aggagctcac catggcaata ttggcaccag tacgcaaccc
1501 agaccagttc aaagctcttg gattggtgac tccagctggg gtcctccttg ctggtcctcc
1561 tggctgtggg aagactctgc tggcgaaggc tgttgcaaat gagtccggac taaattttat
1621 atctgtcaag ggccccgaat tactaaacat gtatgttggt gagagtgaac gtgctgtgcg
1681 acaagttttt caacgagcca agaactcagc accctgtgtg atattctttg atgaagtgga
1741 tgctttatgt cctcgaagat cagaccgaga gacaggggca agtgtccgag tggtgaatca
1801 gctacttaca gagatggatg gtctggaagc acgccagcag gtttttatta tggcagccac
1861 taacaggcca gatataattg accctgcaat cctgcgcccg ggccgcctgg acaaaacact
1921 gtttgtgggt ttaccgcccc ctgcagatcg ccttgccatc ttaaaaacta tcacaaaaaa
1981 tggtaccaaa ccaccactgg atgcagatgt aaatttggaa gcaattgctg gtgaccttcg
2041 ctgtgattgc tatacgggcg cagatctctc tgctttggta cgagaagctt ctatctgtgc
2101 cctgagacag gaaatggcaa gacagaagag tggaaatgaa aaaggtgaac tcaaggttag
2161 tcataagcat tttgaagaag ctttcaagaa agtaagatca tctatatcaa aaaaggatca
2221 aatcatgtat gaacgtttgc aggagtccct cagccggtga tgtctccagc agccggctta
2281 gaggagctag cccatcaagc cggcagagaa tcccccacac gctctgaagg acccactttc
2341 agctggacac aggcgcggcc tcatgtaaac attttatttt caaatgaatg aggccaagct
2401 gaagctgaag ctgaagattc ttcccatctg gc
//