LOCUS AK297389 2100 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50989 complete cds, highly similar to
Eomesodermin homolog.
ACCESSION AK297389
VERSION AK297389.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2100)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2100
/clone="FCBBF3019147"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000492013"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 280..1539
/codon_start=1
/note="highly similar to Eomesodermin homolog"
/protein_id="BAH12568.1"
/transl_table=1
/translation="MIITKQGRRMFPFLSFNINGLNPTAHYNVFVEVVLADPNHWRFQ
GGKWVTCGKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMI
VLQSLHKYQPRLHIVEVTEDGVEDLNEPSKTQTFTFSETQFIAVTAYQNTDITQLKID
HNPFAKGFRDNYDSMYTASENDRLTPSPTDSPRSHQIVPGGRYGVQSFFPEPFVNTLP
QARYYNGERTVPQTNGLLSPQQSEEVANPPQRWLVTPVQQPGTNKLDISSYESEYTSS
TLLPYGIKSLPLQTSHALGYYPDPTFPAMAGWGGRGSYQRKMAAGLPWTSRTSPTVFS
EDQLSKEKVKEEIGSSWIETPPSIKSLDSNDSGVYTSACKRRRLSPSNSSNENSPSIK
CEDINAEEYSKDTSKGMGGYYAFYTTP"
BASE COUNT 588 a 501 c 475 g 536 t
ORIGIN
1 gtttccaagt ggtcaacttg accgatgctt tggcaattga aaaagggcag aaaggcgcgg
61 gctagtgggt ggatggggac aaagatctaa gtcaccttct tccagcgtgt gagcctggga
121 ggagggtggg ggtcctgagg agcaagaggt acgaggaagg aaaaggagag ggcttctggg
181 ttagtttcca cctcctgctt tccaggttct ggcttccgtg cccacgtcta cctgtgcaac
241 cggcctctgt ggctcaaatt ccaccgccac caaactgaga tgatcattac gaaacagggc
301 aggcgcatgt ttcctttctt gagcttcaac ataaacggac tcaatcccac tgcccactac
361 aatgtgttcg tagaggtggt gctggcggac cccaaccact ggcgcttcca ggggggcaaa
421 tgggtgacct gtggcaaagc cgacaataac atgcagggca acaaaatgta tgttcaccca
481 gagtctccta atactggttc ccactggatg agacaggaga tttcattcgg gaaattaaaa
541 ctcaccaata acaaaggcgc aaataacaac aacacccaga tgatagtctt acaatcctta
601 cacaaatacc aaccccgact gcatattgtt gaagttacag aggatggcgt ggaggacttg
661 aatgagccct caaagaccca gacttttacc ttctcagaaa cgcaattcat tgcagtgact
721 gcctaccaaa acaccgatat tactcaacta aagattgatc ataacccctt tgcaaaaggc
781 ttcagagaca actatgattc catgtacacc gcttcagaaa atgacaggtt aactccatct
841 cccacggatt ctcctagatc ccatcagatt gtccctggag gtcggtacgg cgttcaatcc
901 ttcttcccgg agccctttgt caacacttta cctcaagccc gctattataa tggcgagaga
961 accgtgccac agaccaacgg cctcctttca ccccaacaga gcgaagaggt ggccaaccct
1021 ccccagcggt ggcttgtcac gcctgtccag caacctggga ccaacaaact agacatcagt
1081 tcctatgaat ctgaatatac ttctagcaca ttgctcccat atggcattaa atccttgccc
1141 cttcagacat cccatgccct ggggtattac ccagacccaa cctttcctgc aatggcaggg
1201 tggggaggtc gaggttctta ccagaggaag atggcagctg gactaccatg gacctccaga
1261 acaagcccca ctgtgttctc tgaagatcag ctctccaagg agaaagtgaa agaggaaatt
1321 ggctcttctt ggatagagac acccccttcc atcaaatctc tagattccaa tgattcagga
1381 gtatacacca gtgcttgtaa gcgaaggcgg ctgtctccta gcaactccag taatgaaaat
1441 tcaccctcca taaagtgtga ggacattaat gctgaagagt atagtaaaga cacctcaaaa
1501 ggcatgggag ggtattatgc tttttacaca actccctaaa gagttatttt aacctcaaaa
1561 attagctaac tttttgcaga tggacttggt ggtgtttttt gttgtcttct ttgcctaggt
1621 tgccaaaaag atgtttgcct tccaccttga tgcatcctgt tttgtgcaat tctctaaaag
1681 aaggtgccaa agctttttga ttgctgcagg taactgaaac aagcctagca tttttaaaaa
1741 ataagattaa tggaagactt taaggtattt taaaattcga agggtatcca aggttctgta
1801 tttatttatt ggggagacac taacaattca aagaagcagg ctgtgaacat tgggtgccca
1861 gtgctatcag atgagttaaa acctttgatt ctcatttcta tttgtaaatt cttaagcaaa
1921 tagaagccga gtgttaaggt gttttgcttc tgaaagaggg ctgtgccttc cgtttcagaa
1981 ggagacattt tgctgttaca ttctgccagg ggcaaaagat actaggccca ggagtcaaga
2041 aaagcttttg tgaaagtgat agtttcacct gactttgatt ccttaacccc cggcttttgg
//