LOCUS AK297355 3020 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60085 partial cds, highly similar to
Nucleolar protein 8.
ACCESSION AK297355
VERSION AK297355.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3020)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3020
/clone="FCBBF3014686"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491979"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 221..>3020
/codon_start=1
/note="highly similar to Nucleolar protein 8"
/protein_id="BAG59803.1"
/transl_table=1
/translation="MKVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKD
DQGNPQKVFAYINISVAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREAA
KAKKEESTTGNANLLEKTGGVDFHMKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNQHK
RKIIKYDPSKYCHNLKKIGEDFSNTIPISSLTWELEGGNDPMSKKRRGEFSDFHGPPK
KIIKVQKDESSTGSLAMSTRPRRVIERPPLTQQQAAQKRTCDSITPSKSSPVPVSDTQ
KLKNLPFKTSGLETAKKRNSISDDDTDSEDELRMMIAKEENLQRTTQPSINESESDPF
EVVRDDFKSGVHKLHSLIGLGIKNRVSCHDSDDDIMRNDREYDSGDTDEIIAMKKNVA
KVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESALSHGLKSLNRKSP
SHSSSSEDADSASELADSEGGEEYNAMMKNCLRVNPTLADLEQLAGSDLKVPNEDTKS
DGPETTTQCKFDRGSKSPKTPTGLRRGRQCIRPAEIVASLLEGVGCLYEKESMKKSLK
DSVASNNKDQNSMKHEDPSIISMEDGSPYVNGSLGEVTPCQHAKKANGPNYIQPQKRQ
TTFESQDRKAVSPSSSEKRSKNPISRPLEGKKSLSLSAKTHNIGFDKDSCHSTTKTEA
SQEERSDSSGLTSLKKSPKVSSKDTREIKTDFSLSISNSSDVSAKDKHAEDNEKRLAA
LEARQKAKEVQKKLVHNALANLDGHPEDKPTHIIFGSDSECETEETSTQEQSHPGEEW
VKESMGKTSGKLFDSSDDDESDSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGTDDRFR
MDSRFLETDSEEEQEEVNEKKTAEEEELAEEKKKALNVVQSVLQINLSNSTNRGSVAA
KKFKDIIHYDPTKQDRATY"
BASE COUNT 1042 a 578 c 708 g 692 t
ORIGIN
1 cagaagttag gggctgcagc ggcgctggct ttaggtgaac gacgtggtga ggagtgggtt
61 tcgggcatga gaagtcacag ggccgtttcc tagtctctct tcacttcttt gggtcttctc
121 agagaaagaa ggctgccgtg ggtaggctgg gggcggagac tatcgggaag agaaaattac
181 ttttcccact gaaacacacc caagtatatg cccagccttc atgaaagtga acagagaaac
241 gaagcgcctt tatgtgggtg gccttagcca ggacatttct gaggcagacc tacaaaatca
301 gttcagcaga tttggagaag tttcggatgt ggagatcatc acacggaaag atgaccaagg
361 aaacccacag aaagtttttg catatatcaa catcagtgta gcagaagcgg acctgaaaaa
421 atgtatgtct gttttaaata aaacaaaatg gaaaggtgga acattacaaa ttcaactagc
481 aaaagaaagc tttctgcaca gattggccca agagagagaa gcagcaaaag ctaagaaaga
541 agaatcaaca acaggtaacg ccaacttgtt agaaaagaca ggaggagtgg atttccatat
601 gaaagctgtg ccagggacag aagtgccagg gcataagaat tgggttgtga gcaaatttgg
661 aagagtctta cctgttcttc accttaaaaa tcaacataaa cgtaaaatca tcaaatatga
721 tccctcaaaa tactgccaca acctgaagaa gataggggag gatttctcaa acaccattcc
781 tatatccagc ctgacttggg aattagaagg agggaatgac cctatgagta agaaacggcg
841 aggagagttc tctgactttc atggccctcc caagaagata ataaaagtgc agaaggatga
901 gagttccact gggtctctgg ccatgagtac aaggcccagg agggtaatag agagaccacc
961 cttaacacag caacaggctg cacaaaaaag aacttgtgat tccattactc cttctaaatc
1021 atctcctgta cctgtttctg atactcagaa acttaaaaat ctacctttta agacttctgg
1081 cttggaaact gccaagaaga gaaacagcat ttctgatgat gatactgatt ctgaagatga
1141 attgagaatg atgattgcga aagaggaaaa cttacagaga actacacaac cctcaataaa
1201 tgaatctgaa agtgatcctt ttgaagttgt aagggatgat ttcaaatcag gcgttcacaa
1261 actgcattct ttaataggtt taggtatcaa aaatcgtgtc tcttgccatg atagtgatga
1321 tgatattatg agaaatgatc gtgagtatga ctcaggagat acagatgaaa ttattgcgat
1381 gaaaaaaaat gttgctaagg tcaaaaacag tacagaattt tcacaaatgg aaaaatctac
1441 gaagaaaact tctttcaaaa atagagaaaa ctgtgagctt tctgatcact gtattaaact
1501 acaaaaaaga aaaagcaatg tagagtcagc cctcagtcat ggattaaagt ctcttaatcg
1561 taaatctccc tctcactcca gtagcagtga agatgctgat tctgcatcag aattagctga
1621 ctctgaagga ggtgaggagt ataatgccat gatgaaaaac tgccttcgtg tgaatcccac
1681 tttagctgat ttggaacaat tggctggcag tgatctgaag gttccaaatg aagatactaa
1741 gagtgatgga ccagaaacca ccacccaatg caagtttgac agaggctcca agagccccaa
1801 gactcccact ggcctccgca gaggccgaca gtgtattcgt cctgcggaga ttgtggcttc
1861 cctgttagaa ggagtaggct gtctatatga aaaggagtca atgaaaaaat ccttgaaaga
1921 cagtgttgcc tctaacaata aagatcagaa ttccatgaaa catgaggatc ccagtatcat
1981 atccatggaa gatgggtccc catatgttaa tggctcatta ggtgaagtga ctccatgcca
2041 acatgcaaag aaggcgaatg gcccaaacta tattcagcct caaaaaagac agaccacttt
2101 tgaaagccag gatcgcaagg cagtgtcccc tagcagttct gaaaagagaa gtaagaatcc
2161 tatttctagg ccattagaag gtaagaagtc cttaagtctt agtgcaaaga ctcacaacat
2221 aggctttgac aaagacagct gccatagtac cacaaagaca gaagcttcac aggaagagcg
2281 gtctgattca agcggcctca catctctcaa gaaatcacca aaggtctcat ccaaggacac
2341 tcgggaaatc aaaactgatt tctcactttc tattagtaat tcgtcagatg tgagtgctaa
2401 agataagcat gctgaagaca atgagaagcg tttggcagcc ttggaagcga ggcaaaaagc
2461 aaaagaagtg cagaagaagc tggtgcataa tgctctggca aatttggatg gtcatccaga
2521 ggataagcca acgcacatca tcttcggttc tgacagtgaa tgtgaaacag aggagacatc
2581 gactcaggag cagagccatc caggagagga atgggtgaaa gagtctatgg gtaaaacatc
2641 agggaagctg tttgatagca gtgatgatga cgaatctgat tctgaagatg acagtaatag
2701 gttcaaaatt aaacctcagt ttgagggcag agctggacag aagctcatgg atttacagtc
2761 gcactttggc accgatgaca gattccgcat ggactctcga tttctagaaa ctgacagtga
2821 agaggaacag gaagaggtaa atgaaaagaa aactgctgag gaagaagagc ttgctgaaga
2881 aaaaaagaaa gccctgaatg ttgtacaaag tgttttgcaa atcaacttaa gcaattctac
2941 aaacagagga tcagtagctg ctaagaaatt taaggacatc atacattatg atccaacgaa
3001 gcaagaccgt gccacttacg
//