LOCUS AK297334 2005 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53848 complete cds, highly similar to
Inter-alpha-trypsin inhibitor heavy chain H2 precursor.
ACCESSION AK297334
VERSION AK297334.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2005)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2005
/clone="FCBBF3012470"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491958"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 68..1699
/codon_start=1
/note="highly similar to Inter-alpha-trypsin inhibitor
heavy chain H2 precursor"
/protein_id="BAG59791.1"
/transl_table=1
/translation="MKRLTCFFICFFLSEVSGFEIPINGLSEFVDYEDLVVLYDVKRE
EKAGELEVFNGYFVHFFAPDNLDPIPKNILFVIDVSGSMWGVKMKQTVEAMKTILDDL
RAEDHFSVIDFNQNIRTWRNDLISATKTQVADAKRYIEKIQPSGGTNINEALLRAIFI
LNEANNLGLLDPNSVSLIILVSDGDPTVGELKLSKIQKNVKENIQDNISLFSLGMGFD
VDYDFLKRLSNENHGIAQRIYGNQDTSSQLKKFYNQVSTPLLRNVQFNYPHTSVTDVT
QNNFHNYFGGSEIVVAGKFDPAKLDQIESVITATSANTQLVLETLAQMDDLQDFLSKD
KHADPDFTRKLWAYLTINQLLAERSLAPTAAAKRRITRSILQMSLDHHIVTPLTSLVI
ENEAGDERMLADAPPQDPSCCSGALYYGSKVVPDSTPSWANPSPTPVISMLAQGSQVL
ESTPPPHVMRVENDPHFIIYLPKSQKNICFNIDSEPGKILNLVSDPESGIVVNGQLVG
AKKPNNGKLSTYFGKLGFYFQSEDIKIEIRGCRSQ"
BASE COUNT 608 a 463 c 447 g 487 t
ORIGIN
1 agtaggaaga agtgatatcc tccccagacc atctgctttg gggagcttgg caaaactgtc
61 cagcaaaatg aaaagactca cgtgcttttt catctgcttc tttctttctg aagtatcagg
121 cttcgaaatc cccataaatg gactttctga atttgtagac tatgaagatc ttgtggtgct
181 gtatgacgtg aaaagagaag agaaggctgg tgaactggag gtgtttaatg gatattttgt
241 ccacttcttt gctcctgaca acctggaccc aattcccaaa aacatcctct ttgtcatcga
301 tgtgagtggc tccatgtggg gagttaaaat gaaacaaact gtggaagcaa tgaagaccat
361 attggatgac ctcagagcag aagaccattt ctctgtgatt gatttcaacc agaacattcg
421 aacttggaga aatgatttaa tttcagctac aaaaacacag gttgcagatg ccaagaggta
481 tattgagaaa atccagccca gtggaggcac aaacatcaac gaagcactcc tacgggcaat
541 cttcattttg aatgaagcca ataacttggg actgttagac cccaactccg tctcgctgat
601 cattttggtt tctgatggag atccaacagt gggcgaacta aaactgtcaa aaattcagaa
661 aaacgttaag gagaacatcc aagacaatat ctccttgttc agtttgggca tgggatttga
721 tgtggactat gattttttga agagactgtc caatgaaaac catggaattg cacaaaggat
781 ttatggaaac caggacacgt cttcccagct taagaaattc tacaaccagg tctccactcc
841 attgctccgg aatgttcagt tcaactatcc ccatacatca gtcacggacg tcactcaaaa
901 caatttccat aactactttg gaggctcaga gattgtggtg gcaggaaaat ttgaccctgc
961 taaattggat caaatagaga gcgttatcac ggcgacttcg gctaacacgc agttagtctt
1021 ggagaccctg gcccagatgg acgacttgca ggattttcta tcgaaagaca agcatgcaga
1081 tcccgatttc accaggaaac tgtgggccta tctaaccatc aaccaactgc tagctgaacg
1141 aagcctggct cctacagctg ccgccaagag aagaattaca agatcgatcc tgcagatgtc
1201 tctagaccac cacattgtga ctccgctgac ctcgctggtg atcgagaacg aggctgggga
1261 tgagcgcatg ctggcggatg ccccaccgca ggatccctcc tgctgctcag gggccctgta
1321 ttacggcagc aaagtggttc cagattccac cccgtcttgg gccaatcctt caccaacgcc
1381 cgtgatctcc atgctggcac aaggatctca ggtgctagag tccacgccac ccccacatgt
1441 gatgagagtt gaaaatgacc cacatttcat catttatcta ccaaagagcc aaaagaacat
1501 ttgtttcaat attgactcag aacctggaaa aatcctcaac ctggtttctg acccagaatc
1561 aggaattgta gtcaacggtc agcttgttgg tgccaagaag cccaacaatg gaaaactaag
1621 cacctatttt ggaaaactgg gattttattt ccaaagtgaa gacataaaaa tagaaatcag
1681 agggtgcaga tctcagtgaa gaaagaaaaa gtggtaacta tcaccctgga taaagagatg
1741 tccttttctg ttttacttca tcgtgtttgg aagaagcatc ccgtcaatgt tgactttctg
1801 ggaatctaca taccccctac aaacaagttc tcacctaaag cccacggact aataggccag
1861 ttcatgcagg aaccaaagat acacatcttc aatgagagac caggaaagga ccctgagaag
1921 ccagaggcca gcatggaagt gaaggggcag aagctgatca tcaccagggg cttacagaaa
1981 gactacagaa cggatctagt gtttg
//