LOCUS AK297331 2161 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58199 complete cds, highly similar to Fragile
X mental retardation syndrome-related protein 1.
ACCESSION AK297331
VERSION AK297331.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2161)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2161
/clone="FCBBF3012305"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491955"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 177..1874
/codon_start=1
/note="highly similar to Fragile X mental retardation
syndrome-related protein 1"
/protein_id="BAG59790.1"
/transl_table=1
/translation="MMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC
TMDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDM
HLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQAR
KVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKV
IQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEV
EQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYATDESTVSSVQGSRSYSGRGRGR
RGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRS
VSGGRGRGGPRGGKSPISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRS
RRRRTDEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKE
MAKDVIEEHGPSEKAINGPTSASGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS"
BASE COUNT 708 a 375 c 525 g 553 t
ORIGIN
1 ctttgcggtt ccaacatggc ggagctgacg gtggaggttc gcggctctaa cggggctttc
61 tacaagggat ttatcaaaga tgttcatgaa gactccctta cagttgtttt tgaaaataag
121 tatattcaag agcaaatgac caagagccat gtgggtggtg gttggctaaa gttcggatga
181 tgaaaggaga attttatgtc attgagtatg ctgcttgtga cgctacttac aatgaaatag
241 tcacatttga acgacttcgg cctgtcaatc aaaataaaac tgtcaaaaaa aataccttct
301 ttaaatgcac aatggatgtt cctgaggatt tgagagaggc gtgtgctaat gaaaatgcac
361 ataaagattt taagaaagca gtaggagcat gcagaatttt ttaccatcca gaaacaacac
421 agctaatgat actgtctgcc agtgaagcaa ctgtgaagag agtaaacatc ttaagtgaca
481 tgcatttgcg aagtattcgt acgaagttga tgcttatgtc cagaaatgaa gaggccacta
541 agcatttaga atgcacaaaa caacttgcag cagcttttca tgaggaattt gttgtgagag
601 aagatttaat gggcctggca ataggaacac atggtagtaa catccagcaa gctaggaagg
661 ttcctggagt taccgccatt gagctagatg aagatactgg aacattcaga atctacggag
721 agagtgctga tgctgtaaaa aaggctagag gtttcttgga atttgtggag gattttattc
781 aggttcctag gaatctcgtt ggaaaagtaa ttggaaaaaa tggcaaagtt attcaagaaa
841 tagtggacaa atctggtgtg gttcgagtga gaattgaagg ggacaatgaa aataaattac
901 ccagagaaga cggtatggtt ccatttgtat ttgttggcac taaagaaagc attggaaatg
961 tgcaggttct tctagagtat catattgcct atctaaagga agtagaacag ctaagaatgg
1021 aacgcctaca gattgatgaa cagctgcgac agattggtat gggtttcaga ccttcttcca
1081 ccagagggcc tgaaaaagag aaaggatatg ccactgatga aagtaccgtc tcttctgtac
1141 aaggttctag gtcttatagc ggaagaggca gaggtcgtcg gggacctaat tacacctccg
1201 gttatggtac aaattctgag ctgtctaacc cctctgaaac ggaatctgag cgtaaagacg
1261 agctgagtga ctggtcattg gcaggagaag atgatcgaga cagccgacat cagcgtgaca
1321 gcaggagacg cccaggagga agaggcagaa gtgtttcagg gggtcgaggt cgtggtggac
1381 cacgtggtgg caaatccccc atcagttctg tgctcaaaga tccagacagc aatccataca
1441 gcttacttga taatacagaa tcagatcaga ctgcagacac tgatgccagc gaatctcatc
1501 acagtactaa ccgtcgtagg cggtctcgta gacgaaggac tgatgaagat gctgttctga
1561 tggatggaat gactgaatct gatacagctt cagttaatga aaatgggcta gtcacagttg
1621 cagattatat ttctagagct gagtctcaga gcagacaaag aaacctccca agggaaactt
1681 tggctaaaaa caagaaagaa atggcaaaag atgtgattga agagcatggt ccttcagaaa
1741 aggcaataaa cggcccaact agtgcttctg gcgatgacat ttctaagcta cagcgtactc
1801 caggagaaga aaagattaat accttaaaag aagaaaacac tcaagaagca gcagtcctga
1861 atggtgtttc ataaactgaa gaagttccta gtttacagtt cttttacatt acatttacaa
1921 tagtgcttgt acaagcttgc caaagataga atatggatcg ccagtcttta catcgcactt
1981 tcagttcctc catttggaat tcaaaaaggg gagggatcct gaagaaatca tatgttaaac
2041 atactttgac acctactgtg ttataaaata tatcatcaga tgtgccttga gaatagtata
2101 tgtaacatta aaaaaaagtt gctggctata ggaaatgtta ttttgttttc aaaatatggc
2161 a
//