LOCUS AK297314 2321 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59343 complete cds, highly similar to
Exportin-2.
ACCESSION AK297314
VERSION AK297314.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2321)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2321
/clone="FCBBF3011078"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491938"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 320..2119
/codon_start=1
/note="highly similar to Exportin-2"
/protein_id="BAG59779.1"
/transl_table=1
/translation="MLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDF
HVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHAND
ASALRILFSSLILISKLFYSLNFQDLPEFFEDNMETWMNNFHTLLTLDNKLLQTDDEE
EAGLLELLKSQICDNAALYAQKYDEEFQRYLPRFVTAIWNLLVTTGQEVKYDLLVSNA
IQFLASVCERPHYKNLFEDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLE
GSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYL
VTSLASKAQTQKHGITQANELVNLTEFFVNHILPDLKSANVNEFPVLKADGIKYIMIF
RNQVPKEHLLVSIPLLINHLQAESIVVHTYAAHALERLFTMRGPNNATLFTAAEIAPF
VEILLTNLFKALTLPGSSENEYIMKAIMRSFSLLQEAIIPYIPTLITQLTQKLLAVSK
NPSKPHFNHYMFEAICLSIRITCKANPAAVVNFEEALFLVFTEILQNDVQEFIPYVFQ
VMSLLLETNLHSAIPETSEFQNNQVYQEFFSLY"
BASE COUNT 713 a 441 c 456 g 711 t
ORIGIN
1 atttttgccg gggtttgaat gtgaggcgga gcggcggcag gagcgggtag tgccagctac
61 ggtccgcggc tggggttccc tcctccgttt ctgtatccga cgtccagctg agaaatttct
121 tgaatctgtt gaaggaaatc agaattatcc actgttgctt ttgacattac tggagaagtc
181 ccaggataat gttatcaaag tatgtgcttc agtaacattc aaaaactata ttaaaaggaa
241 ctggagaatt gttgaagatg aaccaaacaa aatttgtgaa gccgatcgag tggccattaa
301 agccaacata gtgcacttga tgcttagcag cccagagcaa attcagaagc agttaagtga
361 tgcaattagc attattggca gagaagattt tccacagaaa tggcctgact tgctgacaga
421 aatggtgaat cgctttcaga gtggagattt ccatgttatt aatggagtcc tccgtacagc
481 acattcatta tttaaaagat accgtcatga atttaagtca aacgagttat ggactgaaat
541 taagcttgtt ctggatgcct ttgctttgcc tttgactaat ctttttaagg ccactattga
601 actctgcagt acccatgcaa atgatgcctc tgccctgagg attctgtttt cttccctgat
661 cctgatctca aaattgttct atagtttaaa ctttcaggat ctccctgaat tttttgaaga
721 taatatggaa acttggatga ataattttca tactctctta acattggata ataagctttt
781 acaaactgat gatgaagagg aagccggctt attggagctc ttaaaatccc agatttgtga
841 taatgccgca ctctatgcac aaaagtacga tgaagaattc cagcgatacc tgcctcgttt
901 tgttacagcc atctggaatt tactagttac aacgggtcaa gaggttaaat atgatttgtt
961 ggtaagtaat gcaattcaat ttctggcttc agtttgtgag agacctcatt ataagaatct
1021 atttgaggac cagaacacgc tgacaagtat ctgtgaaaag gttattgtgc ctaacatgga
1081 atttagagct gctgatgaag aagcatttga agataattct gaggagtaca taaggagaga
1141 tttggaagga tctgatattg atactagacg cagggctgct tgtgatctgg tacgaggatt
1201 atgcaagttt tttgagggac ctgtgacagg aatcttctct ggttatgtta attccatgct
1261 gcaggaatac gcaaaaaatc catctgtcaa ctggaaacac aaagatgcag ccatctacct
1321 agtgacatct ttggcatcaa aagcccaaac acagaagcac ggaattacac aagcaaatga
1381 acttgtaaac ctaactgagt tctttgtgaa tcacatcctc cctgatttaa aatcagctaa
1441 tgtgaatgaa tttcctgtcc ttaaagctga cggtatcaaa tatattatga tttttagaaa
1501 tcaagtgcca aaagaacatc ttttagtctc gattcctctc ttgattaatc atcttcaagc
1561 tgaaagtatt gttgttcata cttacgcagc tcatgctctt gaacggctct ttactatgcg
1621 agggcctaac aatgccactc tctttacagc tgcagaaatc gcaccgtttg ttgagattct
1681 gctaacaaac cttttcaaag ctctcacact tcctggctct tcagaaaatg aatatattat
1741 gaaagctatc atgagaagtt tttctctcct acaagaagcc ataatcccct acatccctac
1801 tctcatcact cagcttacac agaagctatt agctgttagt aagaacccaa gcaaacctca
1861 ctttaatcac tacatgtttg aagcaatatg tttatccata agaataactt gcaaagctaa
1921 ccctgctgct gttgtaaatt ttgaggaggc tttgtttttg gtgtttactg aaatcttaca
1981 aaatgatgtg caagaattta ttccatacgt ctttcaagtg atgtctttgc ttctggaaac
2041 aaatcttcat tctgctattc cagagacttc agaattccaa aacaaccaag tttatcaaga
2101 gttttttagt ctttattaat ttgtattgca taaaatatgg ggcactagca ctacaagaaa
2161 tatttgatgg tatacaacca aaaatgtttg gaatggtttt ggaaaaaatt attattcctg
2221 aaattcagaa ggtatctgga aatgtagaga aaaagatctg tgcggttggc ataaccaaat
2281 tactaacaga atgtccccca atgatggaca ctgagtatac c
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