LOCUS AK297293 2338 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61314 complete cds, highly similar to
Receptor-type tyrosine-protein phosphatase alpha precursor (EC
3.1.3.48).
ACCESSION AK297293
VERSION AK297293.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2338)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2338
/clone="FCBBF3009396"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491917"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 762..2000
/codon_start=1
/note="highly similar to Receptor-type tyrosine-protein
phosphatase alpha precursor (EC 3.1.3.48)"
/protein_id="BAH12540.1"
/transl_table=1
/translation="MTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQY
AGAIVVHCSAGVGRTGTFVVIDAMLDMMHTERKVDVYGFVSRIRAQRCQMVQTDMQYV
FIYQALLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKLTSIKIQNDKM
RTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQG
PLLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSDGLVSYGDITVELKKEE
ECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMISIIAAVQKQQQQSG
NHPITVHCSAGAGRTGTFCALSTVLERVKAEGTLDVFQTVKSLRLQRPHMVQTLEQYE
FCYKVVQEYIDAFSDYANFK"
BASE COUNT 632 a 574 c 607 g 525 t
ORIGIN
1 gatcgcgctc ggaccccggc cgctgccgcc atcactgtcg cccgcccagt cgcccctcag
61 ccgcttcccc tcgccatgga ggcgaggccg ccgccgccgc cgcggggctc ggagccgcgg
121 gccgggcggc ggccctgagg gctagtggcg gcccgaaacg ccgccgcgga gccgaggcgg
181 agccgctgtc ctcgtcccca gcggtcccgc ccaacgcccg actctgtgac acaactaaaa
241 aaaaacaaag gtatttatgg aattccactg agtggtaatg gatgatgcag ttcaaataac
301 taaggacaca tgttcaaaga gcataattaa ctttttaaaa gaagctagta attctgactc
361 gaaggacaga agagatgaga caccaattat tgcggtgatg gtggccctgt cctctctgct
421 agtgatcgtg tttattatca tagttttgta catgttaagg tttaagaaat acaagcaagc
481 tgggagccat tccaattctt tccgcttatc caacggccgc actgaggatg tggagcccca
541 gagtgtgcca cttctggcca gatccccaag caccaacagg atatacccac ccctgcccgt
601 ggacaagctg gaagaggaaa ttaaccggag aatggcagac gacaataagc tcttcaggga
661 ggaattcaac gctctccctg catgtcctat ccaggccacc tgtgaggctg cttccaagga
721 ggaaaacaag gaaaaaaatc gatatgtaaa catcttgcct tatgaccaac agaaagccac
781 agcgcctcat cactcagttc cactttacca gctggccaga ctttggggtg ccttttaccc
841 cgatcggcat gctcaagttc ctcaagaagg tgaaggcctg taaccctcag tatgcagggg
901 ccatcgtggt ccactgcagt gcaggtgtag ggcgtacagg tacctttgtc gtcattgatg
961 ccatgctgga catgatgcat acagaacgga aggtggacgt gtatggcttt gtgagccgga
1021 tccgggcaca gcgctgccag atggtgcaaa ccgatatgca gtatgtcttc atataccaag
1081 cccttctgga gcattatctc tatggagata cagaactgga agtgacctct ctagaaaccc
1141 acctgcagaa aatttacaac aaaatcccag ggaccagcaa caatggattg gaggaggagt
1201 ttaagaagtt aacatcaatc aaaatccaga atgacaagat gcggactgga aaccttccag
1261 ccaacatgaa gaagaaccgt gttttacaga tcattccata tgaattcaac agagtgatca
1321 ttccagttaa gcggggcgaa gagaatacag actatgtgaa cgcatccttt attgatggct
1381 accggcagaa ggactcctat atcgccagcc agggccctct tctccacaca attgaggact
1441 tctggcgaat gatctgggag tggaaatcct gctctatcgt gatgctaaca gaactggagg
1501 agagaggcca ggagaagtgt gcccagtact ggccatctga tggactggtg tcctatggag
1561 atattacagt ggaactgaag aaggaggagg aatgtgagag ctacaccgtc cgagacctcc
1621 tggtcaccaa caccagggag aataagagcc ggcagatccg gcagttccac ttccatggct
1681 ggcctgaagt gggcatcccc agtgacggaa agggcatgat cagcatcatc gccgccgtgc
1741 agaagcagca gcagcagtca gggaaccacc ccatcaccgt gcactgcagc gccggggcag
1801 gaaggacggg gaccttctgt gccctgagca ccgtcctgga gcgtgtgaaa gcagagggga
1861 ctttggatgt cttccagact gtcaagagcc tgcggctaca gaggccacac atggtccaga
1921 cactggaaca gtatgagttc tgctacaagg tggtgcagga gtatattgat gcattctcag
1981 attatgccaa cttcaagtaa gcggcaacaa gggtccgtgg accaggagga ttgcctttaa
2041 tattttgtaa tattctgttt tgttaatata ccccaaattg tgtatatatc ttataactgt
2101 tttagaaatt ggtacatagg cttctattac ctattaggtg gaaattttat atgtaaatgt
2161 gttagcactg atagtccttt ttccaatgtt ttattgggga attaaatagt gtgatgtttg
2221 gattgatatc gtgaaatcct cagccgagaa attgggctgg attgtgcttt ggttaataca
2281 tctttcccta aagaagataa acacaaaatc cattccaggt agctcggcac caactaag
//