LOCUS AK297270 2554 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54022 complete cds, highly similar to
Exportin-2.
ACCESSION AK297270
VERSION AK297270.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2554)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2554
/clone="FCBBF3006662"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491894"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 118..2406
/codon_start=1
/note="highly similar to Exportin-2"
/protein_id="BAG59743.1"
/transl_table=1
/translation="MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGNQNYPL
LLLTLLEKSQDNVIKVCASVTFKNYIKRNWRIVEDEPNKICEADRVAIKANIVHLMLS
SPEQIQKQLSDAISIIGREDFPQKWPDLLTSICEKVIVPNMEFRAADEEAFEDNSEEY
IRRDLEGSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHK
DAAIYLVTSLASKAQTQKHGITQANELVNLTEFFVNHILPDLKSANVNEFPVLKADGI
KYIMIFRNQVPKEHLLVSIPLLINHLQAESIVVHTYAAHALERLFTMRGPNNATLFTA
AEIAPFVEILLTNLFKALTLPGSSENEYIMKAIMRSFSLLQEAIIPYIPTLITQLTQK
LLAVSKNPSKPHFNHYMFEAICLSIRITCKANPAAVVNFEEALFLVFTEILQNDVQEF
IPYVFQVMSLLLETHKNDIPSSYMALFPHLLQPVLWERTGNIPALVRLLQAFLERGSN
TIASAAADKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLF
QRLQNSKTTKFIKSFLVFINLYCIKYGALALQEIFDGIQPKMFGMVLEKIIIPEIQKV
SGNVEKKICAVGITKLLTECPPMMDTEYTKLWTPLLQSLIGLFELPEDDTIPDEEHFI
DIEDTPGYQTAFSQLAFAGKKEHDPVGQMVNNPKIHLAQSLHKLSTACPGRVPSMVST
SLNAEALQYLQGYLQAASVTLL"
BASE COUNT 791 a 524 c 501 g 738 t
ORIGIN
1 attttttgcc ggggtttgaa tgtgaggcgg agcggcggca ggagcgggta gtgccagcta
61 cggtccgcgg ctggggttcc ctcctccgtt tctgtatccc cacgagatcc tatagcaatg
121 gaactcagcg atgcaaatct gcaaacacta acagaatatt taaagaaaac acttgatcct
181 gatcctgcca tccgacgtcc agctgagaaa tttcttgaat ctgttgaagg aaatcagaat
241 tatccactgt tgcttttgac attactggag aagtcccagg ataatgttat caaagtatgt
301 gcttcagtaa cattcaaaaa ctatattaaa aggaactgga gaattgttga agatgaacca
361 aacaaaattt gtgaagccga tcgagtggcc attaaagcca acatagtgca cttgatgctt
421 agcagcccag agcaaattca gaagcagtta agtgatgcaa ttagcattat tggcagagaa
481 gattttccac agaaatggcc tgacttgctg acaagtatct gtgaaaaggt tattgtgcct
541 aacatggaat ttagagctgc tgatgaagaa gcatttgaag ataattctga ggagtacata
601 aggagagatt tggaaggatc tgatattgat actagacgca gggctgcttg tgatctggta
661 cgaggattat gcaagttttt tgagggacct gtgacaggaa tcttctctgg ttatgttaat
721 tccatgctgc aggaatacgc aaaaaatcca tctgtcaact ggaaacacaa agatgcagcc
781 atctacctag tgacatcttt ggcatcaaaa gcccaaacac agaagcatgg aattacacaa
841 gcaaatgaac ttgtaaacct aactgagttc tttgtgaatc acatcctccc tgatttaaaa
901 tcagctaatg tgaatgaatt tcctgtcctt aaagctgacg gtatcaaata tattatgatt
961 tttagaaatc aagtgccaaa agaacatctt ttagtctcga ttcctctctt gattaatcat
1021 cttcaagctg aaagtattgt tgttcatact tacgcagctc atgctcttga acggctcttt
1081 actatgcgag ggcctaacaa tgccactctc tttacagctg cagaaatcgc accgtttgtt
1141 gagattctgc taacaaacct tttcaaagct ctcacacttc ctggctcttc agaaaatgaa
1201 tatattatga aagctatcat gagaagtttt tctctcctac aagaagccat aatcccctac
1261 atccctactc tcatcactca gcttacacag aagctattag ctgttagtaa gaacccaagc
1321 aaacctcact ttaatcacta catgtttgaa gcaatatgtt tatccataag aataacttgc
1381 aaagctaacc ctgctgctgt tgtaaatttt gaggaggctt tgtttttggt gtttactgaa
1441 atcttacaaa atgatgtgca agaatttatt ccatacgtct ttcaagtgat gtctttgctt
1501 ctggaaacac acaaaaatga catcccgtct tcctatatgg ccttatttcc tcatctcctt
1561 cagccagtgc tttgggaaag aacaggaaat attcctgctc tagtgaggct tcttcaagca
1621 ttcttagaac gcggttcaaa cacaatagca agtgctgcag ctgacaaaat tcctgggtta
1681 ctaggtgtct ttcagaagct gattgcatcc aaagcaaatg accaccaagg tttttatctt
1741 ctaaacagta taatagagca catgcctcct gaatcagttg accaatatag gaaacaaatc
1801 ttcattctgc tattccagag acttcagaat tccaaaacaa ccaagtttat caagagtttt
1861 ttagtcttta ttaatttgta ttgcataaaa tatggggcac tagcactaca agaaatattt
1921 gatggtatac aaccaaaaat gtttggaatg gttttggaaa aaattattat tcctgaaatt
1981 cagaaggtat ctggaaatgt agagaaaaag atctgtgcgg ttggcataac caaattacta
2041 acagaatgtc ccccaatgat ggacactgag tataccaaac tgtggactcc attattacag
2101 tctttgattg gtctttttga gttacccgaa gatgatacca ttcctgatga ggaacatttt
2161 attgacatag aagatacacc aggatatcag actgccttct cacagttggc atttgctggg
2221 aaaaaagagc atgatcctgt aggtcaaatg gtgaataacc ccaaaattca cctggcacag
2281 tcacttcaca agttgtctac cgcctgtcca ggaagggttc catcaatggt gagcaccagc
2341 ctgaatgcag aagcgctcca gtatctccaa gggtaccttc aggcagccag tgtgacactg
2401 ctttaaactg catttttcta atgggctaaa cccagatggt ttcctaggaa atcacaggct
2461 tctgagcaca gctgcattaa aacaaaggaa gttctccttt tgaacttgtc acgaattcca
2521 tcttgtaaag gatattaaat gttgctttaa cctg
//