LOCUS AK297254 1768 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58021 complete cds, highly similar to Fragile
X mental retardation syndrome-related protein 1.
ACCESSION AK297254
VERSION AK297254.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1768)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1768
/clone="FCBBF3004592"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000491878"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 16..1488
/codon_start=1
/note="highly similar to Fragile X mental retardation
syndrome-related protein 1"
/protein_id="BAG59733.1"
/transl_table=1
/translation="MAELTVEVRGSNGAFYKVYSRANDQEPCGWWLAKVRMMKGEFYV
IEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFK
KAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHL
ECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGE
SADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK
LPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSY
SGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRDSRRQRDSRRR
PGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHS
TNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLGKRCD"
BASE COUNT 565 a 311 c 447 g 445 t
ORIGIN
1 ctttgcggtt ccaacatggc ggagctgacg gtggaggttc gcggctctaa cggggctttc
61 tacaaggtat attcaagagc aaatgaccaa gagccatgtg ggtggtggtt ggctaaagtt
121 cggatgatga aaggagaatt ttatgtcatt gaatatgctg cttgtgacgc tacttacaat
181 gaaatagtca catttgaacg acttcggcct gtcaatcaaa ataaaactgt caaaaaaaat
241 accttcttta aatgcacagt ggatgttcct gaggatttga gagaggcgtg tgctaatgaa
301 aatgcacata aagattttaa gaaagcagta ggagcatgca gaatttttta ccatccagaa
361 acaacacagc taatgatact gtctgccagt gaagcaactg tgaagagagt aaacatctta
421 agtgacatgc atttgcgaag tattcgtacg aagttgatgc ttatgtccag aaatgaagag
481 gccactaagc atttagaatg cacaaaacaa cttgcagcag cttttcatga ggaatttgtt
541 gtgagagaag atttaatggg cctggcaata ggaacacatg gtagtaacat ccagcaagct
601 aggaaggttc ctggagttac cgccattgag ctagatgaag atactggaac attcagaatc
661 tacggagaga gtgctgatgc tgtaaaaaag gctagaggtt tcttggaatt tgtggaggat
721 tttattcagg ttcctaggaa tctcgttgga aaagtaattg gaaaaaatgg caaagttatt
781 caagaaatag tggacaaatc tggtgtggtt cgagtgagaa ttgaagggga caatgaaaat
841 aaattaccca gagaagacgg tatggttcca tttgtatttg ttggcactaa agaaagcatt
901 ggaaatgtgc aggttcttct agagtatcat attgcctatc taaaggaagt agaacagcta
961 agaatggaac gcctacagat tgatgaacag ctgcgacaga ttggttctag gtcttatagc
1021 ggaagaggca gaggtcgtcg gggacctaat tacacctccg gttatggtac aaattctgag
1081 ctgtctaacc cctctgaaac ggaatctgag cgtaaagacg agctgagtga ttggtcattg
1141 gcaggagaag atgatcgaga cagccgacgt cagcgtgaca gcaggagacg cccaggagga
1201 agaggcagaa gtgtttcagg gggtcgaggt cgtggtggac cacgtggtgg caaatcctcc
1261 atcagttctg tgctcaaaga tccagacagc aatccataca gcttacttga taatacagaa
1321 tcagatcaga ctgcagacac tgatgccagc gaatctcatc acagtactaa ccgtcgtagg
1381 cggtctcgta gacgaaggac tgatgaagat gctgttctga tggatggaat gactgaatct
1441 gatacagctt cagttaatga aaatgggcta ggcaaaagat gtgattgaag agcatggtcc
1501 ttcagaaaag gcaataaacg gcccaactag tgcttctggc gatgacattt ctaagctaca
1561 gcgtactcca ggagaagaaa agattaatac cttaaaagaa gaaaacactc aagaagcagc
1621 agtcctgaat ggtgtttcat aaactgaaga agttcctagt ttacagttct tttacattac
1681 atttacaata gtgcttgtac aagcttgcca aagatagaat atggatcgcc agtctttaca
1741 tcgcactttc agttcctcca tttggaat
//