LOCUS AK297182 1901 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56110 complete cds, highly similar to
Syntabulin.
ACCESSION AK297182
VERSION AK297182.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1901)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1901
/clone="FCBBF2004234"
/clone_lib="FCBBF2"
/db_xref="H-InvDB:HIT000491806"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 47..1648
/codon_start=1
/note="highly similar to Syntabulin"
/protein_id="BAH12518.1"
/transl_table=1
/translation="MFAMKVYGAYLLSSEADFSSSSSTGSISAPEVHMSTAGSKRSSS
SRNRGPHGRSNGASSHKPGSSPSSPREKDLLSMLCRNQLSPVNIHPSYAPSSPSSSNS
GSYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTKLKESER
RLHERESEIVELKSQLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSL
ADKDKGIQKYFVDINIQNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPP
LDTMADGLSLEEQVTGEGADRELLVGDSIANSTDLFDEIVTATTTESGDLELVHSTPG
ANVLELLPIVMGQEEGSVVVERAVQTDVVPYSPAISELIQSVLQKLQDPCPSSLASPD
ESEPDSMESFPESLSALVVDLTPRNPNSAILLSPVETPYANVDAEVHANRLMRELDFA
ACVEERLDGVIPLARGGVVRQYWSSSFLVDLLAVAAPVVPTVLWAFSTQRGGTDPVYN
IGALLRGCCVVALHSLRRTAFRIKT"
BASE COUNT 461 a 486 c 525 g 429 t
ORIGIN
1 aaaaagacat accccagcct gtgctgggag gctgtttgca gaggcaatgt ttgccatgaa
61 agtctatgga gcttaccttc taagtagtga agctgatttt agctcctcga gcagcacagg
121 cagcatttcc gctcctgagg tccatatgtc gactgcggga agcaagcggt cttcttcttc
181 acgcaatcga ggtcctcatg ggcggagtaa tggagcttcg tcacacaagc ctggcagcag
241 cccatcatcc ccgcgggaaa aggaccttct gtccatgctg tgcaggaatc agctgagccc
301 tgtcaatatc catcccagtt atgcaccttc ttccccaagc agtagcaact caggctccta
361 caaaggaagc gactgtagcc ccatcatgag gcgttctgga aggtacatgt cttgcggtga
421 aaatcatggt gtcagacccc caaacccaga gcagtatttg actccactgc agcagaaaga
481 ggtgacagtg agacacctca aaaccaagct gaaggaatct gagcgccgac tccatgaaag
541 ggaaagtgaa atcgtggagc ttaagtccca gctggcccgc atgcgagagg actggattga
601 ggaggagtgt caccgggtag aggcccagtt ggcactcaaa gaagccagga aagagattaa
661 acagctcaaa caggtcatcg aaaccatgcg gagcagcttg gctgataaag ataaaggcat
721 tcagaaatat tttgtggaca taaacatcca aaacaagaag ctggagtctc tccttcagag
781 catggagatg gcacacagtg gctctctgag ggacgaactg tgcctagact ttccatgtga
841 ttccccagag aagagcttaa ccctcaaccc ccctcttgac acaatggcag atgggttatc
901 tctggaagag caggtcacgg gggaaggggc tgacagggag ctactggtag gagatagcat
961 agccaacagc acagatttgt tcgatgagat agtgacagcc accaccacag aatctggtga
1021 cctggagctt gtgcattcca cccctggggc taacgtcctg gagctgctgc ccatagtcat
1081 gggtcaggag gagggcagtg tggtggtgga gcgagccgtt cagaccgacg tggtgcccta
1141 cagcccagcc atctcagagc tcattcagag tgtgctgcag aagctccagg acccctgtcc
1201 ctcgagcttg gcgtcccctg atgagtctga accagactcg atggagagct tcccagagtc
1261 cctctctgcc ttagtggttg atttaactcc aagaaatcca aactcagcca tccttttgtc
1321 tcccgtggag accccctacg ccaatgtgga tgcagaagtt catgcaaacc gcctcatgag
1381 agagctggat tttgcagcct gcgtggaaga gaggttggat ggtgtcatcc cactggctcg
1441 cgggggcgtc gtgaggcagt actggagcag cagcttcctg gtggatctcc tggctgtggc
1501 tgcccccgtg gtccccacgg ttctgtgggc attcagtact cagagagggg gaacggatcc
1561 tgtgtataac atcggggcct tgctcagggg ctgttgcgtg gttgccctgc attcgctccg
1621 ccgcaccgcc ttccgtatca aaacctaaat agaagttgtt gttaccgtgt gccaatgtgt
1681 cccatgtggg ttgtgccagg tagagaaaca ggaagtcaat catctgtgac agtctctatt
1741 ctgtcgtttt gctccttggt atttgatttg cactatattt agttgaagcc tgttcactgt
1801 ttaaaaccgg aggtatcttc aaaggcatgg agacctggtt ccagtaaatg tcccaccagt
1861 ggggtataga aagcatgctc atgaccctgc cgtgtcgtct g
//