LOCUS AK297175 1474 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55755 complete cds, highly similar to
LIM/homeobox protein Lhx6.1.
ACCESSION AK297175
VERSION AK297175.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1474)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1474
/clone="FCBBF2002925"
/clone_lib="FCBBF2"
/db_xref="H-InvDB:HIT000491799"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 72..1172
/codon_start=1
/note="highly similar to LIM/homeobox protein Lhx6.1"
/protein_id="BAH12516.1"
/transl_table=1
/translation="MRRGLCRRSAENPDAGPVMAQPGSGCKATTRCLEGTAPPAMAQS
DAEALAGALDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK
VNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASD
WVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGN
GLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGL
SRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSALSDDIHYTPFSSPERARMVT
LHGYIESHPFSVLTLPALPHLPVGAPQLPLSR"
BASE COUNT 301 a 502 c 420 g 251 t
ORIGIN
1 agtaaagaca caggcgaatc aagaggaggc gaggccggta ttgtccgtct gaataggcgc
61 tgatagcgcc gatgcgccgg gggttgtgcc ggcgcagcgc tgagaatccc gacgcggggc
121 cggtgatggc ccagccaggg tccggctgca aagcgaccac ccgctgtctt gaagggaccg
181 cgccgcccgc catggctcag tctgacgccg aggccctggc aggagctctg gacaaggacg
241 agggtcaggc ctccccatgt acgcccagca cgccatctgt ctgctcaccg ccctctgccg
301 cctcctctgt gccgtctgca ggcaagaaca tctgctccag ctgcggcctc gagatcctgg
361 accgatatct gctcaaggtc aacaacctca tctggcacgt gcggtgcctc gagtgctccg
421 tgtgtcgcac gtcgctgagg cagcagaaca gctgctacat caagaacaag gagatcttct
481 gcaagatgga ctacttcagc cgattcggga ccaagtgtgc ccggtgcggc cgacagatct
541 acgccagcga ctgggtgcgg agagctcgcg gcaacgccta ccacctggcc tgcttcgcct
601 gcttctcgtg caagcgccag ctgtccactg gtgaggagtt cggcctggtc gaggagaagg
661 tgctctgccg catccactac gacaccatga ttgagaacct caagagggcc gccgagaacg
721 ggaacggcct cacgttggag ggggcagtgc cctcggaaca ggacagtcaa cccaagccgg
781 ccaagcgcgc gcggacgtcc ttcaccgcgg aacagctgca ggttatgcag gcgcagttcg
841 cgcaggacaa caaccccgac gctcagacgc tgcagaagct ggcggacatg acgggcctca
901 gccggagagt catccaggtg tggtttcaaa actgccgggc gcgtcataaa aagcacacgc
961 cgcaacaccc agtgccgccc tcgggggcgc ccccgtcccg ccttccctcc gccctgtccg
1021 acgacatcca ctacaccccg ttcagcagcc ccgagcgggc gcgcatggtc accctgcacg
1081 gctacattga gagtcatcct ttttcagtac taacgctgcc ggcacttccg catctgcccg
1141 tgggcgcccc acagctgccc ctcagccgct gagatccagt gtccaagctg cggccaggag
1201 tccacccacc tccgcatcca cccccgtccg ccatcctgcc caccaccagg tcggttcccg
1261 aggcctggcc tttccctctc ctgctgagaa ccagaaccca ccaggagcac cacagagtcc
1321 tcctcttgga aggcagaact ccctgaaatc tggaatcagg gtggaaacag cctgtttttc
1381 ccatttaaac aggagtcctc ttcaacttca gctgattaca ataacaaaag gcggaattga
1441 attgtgcgat gccaacggcc ttctcattta cagg
//